Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC068587.9-201ENST00000641814 219 ntBASIC14.4□□□□□ -0.1
CD28P10747 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.4□□□□□ -0.1
CD28P10747 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 AL032819.2-201ENST00000624543 2162 ntBASIC14.4□□□□□ -0.1
CD28P10747 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.4□□□□□ -0.1
CD28P10747 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CD28P10747 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CD28P10747 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD28P10747 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD28P10747 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.39□□□□□ -0.11
CD28P10747 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 AL845331.1-201ENST00000424978 1190 ntBASIC14.39□□□□□ -0.11
CD28P10747 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.39□□□□□ -0.11
CD28P10747 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.39□□□□□ -0.11
CD28P10747 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.39□□□□□ -0.11
CD28P10747 RN7SL510P-201ENST00000581311 263 ntBASIC14.39□□□□□ -0.11
CD28P10747 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CD28P10747 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.39□□□□□ -0.11
CD28P10747 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD28P10747 AC087289.5-201ENST00000586076 3175 ntBASIC14.39□□□□□ -0.11
CD28P10747 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
CD28P10747 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD28P10747 PKD1P1-201ENST00000458669 6805 ntBASIC14.38□□□□□ -0.11
CD28P10747 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.38□□□□□ -0.11
CD28P10747 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.38□□□□□ -0.11
CD28P10747 TOB2P1-201ENST00000469761 992 ntBASIC14.38□□□□□ -0.11
CD28P10747 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 TPSP2-201ENST00000561760 610 ntBASIC14.38□□□□□ -0.11
CD28P10747 AC111152.3-201ENST00000569699 673 ntBASIC14.38□□□□□ -0.11
CD28P10747 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.38□□□□□ -0.11
CD28P10747 IGHV3-41-201ENST00000613121 348 ntBASIC14.38□□□□□ -0.11
CD28P10747 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.38□□□□□ -0.11
CD28P10747 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD28P10747 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms