Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXC6P09630 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HOXC6P09630 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
HOXC6P09630 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC6P09630 AC139887.3-201ENST00000568585 713 ntBASIC20.76■□□□□ 0.91
HOXC6P09630 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 AC007952.6-201ENST00000573168 2673 ntBASIC20.76■□□□□ 0.91
HOXC6P09630 AC003957.1-201ENST00000625108 2673 ntBASIC20.76■□□□□ 0.91
HOXC6P09630 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC6P09630 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 MIR149-201ENST00000384879 89 ntBASIC20.75■□□□□ 0.91
HOXC6P09630 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
HOXC6P09630 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC6P09630 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC6P09630 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 SCARNA2-201ENST00000458748 420 ntBASIC20.75■□□□□ 0.91
HOXC6P09630 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC6P09630 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC6P09630 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC6P09630 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 FAM215A-202ENST00000632077 792 ntBASIC20.75■□□□□ 0.91
HOXC6P09630 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC6P09630 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXC6P09630 TP73-AS1-210ENST00000637775 1455 ntBASIC20.75■□□□□ 0.91
HOXC6P09630 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC6P09630 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC6P09630 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
HOXC6P09630 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC6P09630 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.74■□□□□ 0.91
HOXC6P09630 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXC6P09630 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXC6P09630 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
HOXC6P09630 AL049840.3-201ENST00000602669 611 ntBASIC20.74■□□□□ 0.91
HOXC6P09630 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HOXC6P09630 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HOXC6P09630 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HOXC6P09630 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC6P09630 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HOXC6P09630 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC6P09630 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC6P09630 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC6P09630 AC112777.1-201ENST00000540175 1423 ntBASIC20.73■□□□□ 0.91
HOXC6P09630 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HOXC6P09630 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXC6P09630 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC6P09630 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC6P09630 AC068472.1-201ENST00000474589 881 ntBASIC20.73■□□□□ 0.91
HOXC6P09630 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC6P09630 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HOXC6P09630 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC6P09630 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC6P09630 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC6P09630 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC6P09630 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC6P09630 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC6P09630 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC6P09630 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC6P09630 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC6P09630 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXC6P09630 RPL13AP23-201ENST00000480739 586 ntBASIC20.72■□□□□ 0.91
HOXC6P09630 AC073648.2-201ENST00000510116 352 ntBASIC20.72■□□□□ 0.91
HOXC6P09630 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
HOXC6P09630 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC6P09630 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms