Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
USP1O94782 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.65■□□□□ 0.58
USP1O94782 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 AC093677.2-201ENST00000600169 1863 ntBASIC18.65■□□□□ 0.58
USP1O94782 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 AC034236.2-201ENST00000606662 1610 ntBASIC18.65■□□□□ 0.58
USP1O94782 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP1O94782 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP1O94782 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.65■□□□□ 0.58
USP1O94782 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP1O94782 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP1O94782 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.64■□□□□ 0.57
USP1O94782 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP1O94782 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP1O94782 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.64■□□□□ 0.57
USP1O94782 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.64■□□□□ 0.57
USP1O94782 AL355355.2-201ENST00000442321 338 ntBASIC18.64■□□□□ 0.57
USP1O94782 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.64■□□□□ 0.57
USP1O94782 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.64■□□□□ 0.57
USP1O94782 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP1O94782 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP1O94782 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.64■□□□□ 0.57
USP1O94782 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP1O94782 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP1O94782 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.64■□□□□ 0.57
USP1O94782 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
USP1O94782 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 CRYGFP-201ENST00000418459 633 ntBASIC18.63■□□□□ 0.57
USP1O94782 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.63■□□□□ 0.57
USP1O94782 AP005242.2-201ENST00000580065 1175 ntBASIC18.63■□□□□ 0.57
USP1O94782 AC026471.5-201ENST00000615068 467 ntBASIC18.63■□□□□ 0.57
USP1O94782 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP1O94782 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.63■□□□□ 0.57
USP1O94782 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP1O94782 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
USP1O94782 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
USP1O94782 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
USP1O94782 AC067852.2-201ENST00000590513 2313 ntBASIC18.62■□□□□ 0.57
USP1O94782 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.62■□□□□ 0.57
USP1O94782 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP1O94782 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.62■□□□□ 0.57
USP1O94782 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.62■□□□□ 0.57
USP1O94782 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.62■□□□□ 0.57
USP1O94782 MIR3180-5-201ENST00000583743 153 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms