Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM1O00151 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM1O00151 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM1O00151 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 KRT18P29-201ENST00000397031 1267 ntBASIC17.55■□□□□ 0.4
PDLIM1O00151 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM1O00151 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 AC069544.1-201ENST00000609399 999 ntBASIC17.55■□□□□ 0.4
PDLIM1O00151 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.55■□□□□ 0.4
PDLIM1O00151 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM1O00151 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
PDLIM1O00151 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PDLIM1O00151 FLJ38576-201ENST00000623820 2459 ntBASIC17.55■□□□□ 0.4
PDLIM1O00151 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDLIM1O00151 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.54■□□□□ 0.4
PDLIM1O00151 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 AC233263.1-201ENST00000578059 224 ntBASIC17.54■□□□□ 0.4
PDLIM1O00151 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM1O00151 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDLIM1O00151 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM1O00151 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 RPS2P52-201ENST00000469610 820 ntBASIC17.53■□□□□ 0.4
PDLIM1O00151 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM1O00151 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PDLIM1O00151 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM1O00151 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.53■□□□□ 0.4
PDLIM1O00151 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 AC124283.5-201ENST00000624661 1809 ntBASIC17.53■□□□□ 0.4
PDLIM1O00151 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms