Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 AC113404.2-201ENST00000507884 177 ntBASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 GUSBP12-201ENST00000513727 720 ntBASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 AC008687.5-201ENST00000593746 558 ntBASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMIM28A0A1B0GU29 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 LINC01126-201ENST00000623515 1646 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 LINC00265-3P-201ENST00000447588 903 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 TOB2P1-201ENST00000469761 992 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 AL592071.1-201ENST00000611956 408 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 AC124864.1-201ENST00000623408 392 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 AC126763.1-201ENST00000552015 2118 ntBASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMIM28A0A1B0GU29 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 AL450487.1-201ENST00000426799 995 ntBASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 AP000867.3-201ENST00000524675 377 ntBASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMIM28A0A1B0GU29 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMIM28A0A1B0GU29 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.67■□□□□ 0.74
SMIM28A0A1B0GU29 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM28A0A1B0GU29 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM28A0A1B0GU29 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMIM28A0A1B0GU29 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms