Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3839S4R1W1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3839S4R1W1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3839S4R1W1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Gm3839S4R1W1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.26■□□□□ 0.83
Gm3839S4R1W1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm3839S4R1W1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3839S4R1W1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Gm3839S4R1W1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3839S4R1W1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3839S4R1W1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3839S4R1W1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3839S4R1W1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3839S4R1W1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.23■□□□□ 0.83
Gm3839S4R1W1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3839S4R1W1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3839S4R1W1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3839S4R1W1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3839S4R1W1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3839S4R1W1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3839S4R1W1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm3839S4R1W1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Gm3839S4R1W1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3839S4R1W1 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.18■□□□□ 0.82
Gm3839S4R1W1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3839S4R1W1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm3839S4R1W1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3839S4R1W1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3839S4R1W1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3839S4R1W1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3839S4R1W1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3839S4R1W1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3839S4R1W1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3839S4R1W1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3839S4R1W1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3839S4R1W1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3839S4R1W1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3839S4R1W1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3839S4R1W1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3839S4R1W1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3839S4R1W1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3839S4R1W1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.14■□□□□ 0.81
Gm3839S4R1W1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3839S4R1W1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3839S4R1W1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3839S4R1W1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3839S4R1W1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3839S4R1W1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3839S4R1W1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3839S4R1W1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3839S4R1W1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3839S4R1W1 Scarna2-201ENSMUST00000157560 414 ntBASIC20.11■□□□□ 0.81
Gm3839S4R1W1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3839S4R1W1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.1■□□□□ 0.81
Gm3839S4R1W1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3839S4R1W1 Gm9806-201ENSMUST00000051080 552 ntBASIC20.1■□□□□ 0.81
Gm3839S4R1W1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3839S4R1W1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Terc-201ENSMUST00000082862 423 ntBASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3839S4R1W1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3839S4R1W1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3839S4R1W1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3839S4R1W1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3839S4R1W1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm3839S4R1W1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.08■□□□□ 0.8
Gm3839S4R1W1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3839S4R1W1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm3839S4R1W1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3839S4R1W1 Gm11687-201ENSMUST00000118911 886 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms