Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp17Q9R0S3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp17Q9R0S3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.47■■□□□ 1.03
Mmp17Q9R0S3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp17Q9R0S3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp17Q9R0S3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp17Q9R0S3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp17Q9R0S3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Mmp17Q9R0S3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp17Q9R0S3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp17Q9R0S3 Amer2-203ENSMUST00000225247 2662 ntBASIC21.42■■□□□ 1.02
Mmp17Q9R0S3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp17Q9R0S3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp17Q9R0S3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.42■■□□□ 1.02
Mmp17Q9R0S3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mmp17Q9R0S3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
Mmp17Q9R0S3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp17Q9R0S3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp17Q9R0S3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Mmp17Q9R0S3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Mmp17Q9R0S3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp17Q9R0S3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Mmp17Q9R0S3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp17Q9R0S3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp17Q9R0S3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Mmp17Q9R0S3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp17Q9R0S3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp17Q9R0S3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp17Q9R0S3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp17Q9R0S3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.35■■□□□ 1.01
Mmp17Q9R0S3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Mmp17Q9R0S3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp17Q9R0S3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp17Q9R0S3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Mmp17Q9R0S3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp17Q9R0S3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.34■■□□□ 1.01
Mmp17Q9R0S3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp17Q9R0S3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp17Q9R0S3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.33■■□□□ 1.01
Mmp17Q9R0S3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp17Q9R0S3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.32■■□□□ 1
Mmp17Q9R0S3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp17Q9R0S3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp17Q9R0S3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp17Q9R0S3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Mmp17Q9R0S3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp17Q9R0S3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.31■■□□□ 1
Mmp17Q9R0S3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.3■■□□□ 1
Mmp17Q9R0S3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.3■■□□□ 1
Mmp17Q9R0S3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.3■■□□□ 1
Mmp17Q9R0S3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.29■■□□□ 1
Mmp17Q9R0S3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.29■■□□□ 1
Mmp17Q9R0S3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Mmp17Q9R0S3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.28■■□□□ 1
Mmp17Q9R0S3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.28■■□□□ 1
Mmp17Q9R0S3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp17Q9R0S3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.27■■□□□ 1
Mmp17Q9R0S3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp17Q9R0S3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp17Q9R0S3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.27■■□□□ 1
Mmp17Q9R0S3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp17Q9R0S3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.26■□□□□ 0.99
Mmp17Q9R0S3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Mmp17Q9R0S3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mmp17Q9R0S3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp17Q9R0S3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.25■□□□□ 0.99
Mmp17Q9R0S3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp17Q9R0S3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp17Q9R0S3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp17Q9R0S3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Mmp17Q9R0S3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp17Q9R0S3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.23■□□□□ 0.99
Mmp17Q9R0S3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Mmp17Q9R0S3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp17Q9R0S3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Mmp17Q9R0S3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp17Q9R0S3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp17Q9R0S3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms