Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gpc6Q9R087 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.99■□□□□ 0.95
Gpc6Q9R087 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gpc6Q9R087 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gpc6Q9R087 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gpc6Q9R087 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gpc6Q9R087 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gpc6Q9R087 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gpc6Q9R087 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.97■□□□□ 0.95
Gpc6Q9R087 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gpc6Q9R087 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gpc6Q9R087 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.97■□□□□ 0.95
Gpc6Q9R087 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gpc6Q9R087 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Gpc6Q9R087 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Gpc6Q9R087 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gpc6Q9R087 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gpc6Q9R087 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gpc6Q9R087 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.94■□□□□ 0.94
Gpc6Q9R087 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.94■□□□□ 0.94
Gpc6Q9R087 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gpc6Q9R087 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Gpc6Q9R087 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
Gpc6Q9R087 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gpc6Q9R087 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gpc6Q9R087 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Notumos-201ENSMUST00000151998 2659 ntBASIC20.92■□□□□ 0.94
Gpc6Q9R087 Particl-201ENSMUST00000205370 1560 ntBASIC20.92■□□□□ 0.94
Gpc6Q9R087 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Gpc6Q9R087 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gpc6Q9R087 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gpc6Q9R087 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gpc6Q9R087 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gpc6Q9R087 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gpc6Q9R087 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Gpc6Q9R087 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gpc6Q9R087 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gpc6Q9R087 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gpc6Q9R087 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Gpc6Q9R087 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gpc6Q9R087 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gpc6Q9R087 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gpc6Q9R087 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gpc6Q9R087 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.84■□□□□ 0.93
Gpc6Q9R087 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.84■□□□□ 0.93
Gpc6Q9R087 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.84■□□□□ 0.93
Gpc6Q9R087 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gpc6Q9R087 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gpc6Q9R087 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gpc6Q9R087 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Gpc6Q9R087 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Gpc6Q9R087 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Gpc6Q9R087 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gpc6Q9R087 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gpc6Q9R087 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Gpc6Q9R087 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gpc6Q9R087 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gpc6Q9R087 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gpc6Q9R087 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gpc6Q9R087 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.81■□□□□ 0.92
Gpc6Q9R087 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gpc6Q9R087 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gpc6Q9R087 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gpc6Q9R087 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gpc6Q9R087 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gpc6Q9R087 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gpc6Q9R087 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gpc6Q9R087 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Gpc6Q9R087 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gpc6Q9R087 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gpc6Q9R087 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms