Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Crlf1Q9JM58 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crlf1Q9JM58 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.61■□□□□ 0.57
Crlf1Q9JM58 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.61■□□□□ 0.57
Crlf1Q9JM58 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.61■□□□□ 0.57
Crlf1Q9JM58 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Crlf1Q9JM58 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crlf1Q9JM58 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crlf1Q9JM58 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Crlf1Q9JM58 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Crlf1Q9JM58 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Crlf1Q9JM58 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.59■□□□□ 0.57
Crlf1Q9JM58 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.58■□□□□ 0.57
Crlf1Q9JM58 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Crlf1Q9JM58 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Crlf1Q9JM58 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Crlf1Q9JM58 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Crlf1Q9JM58 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crlf1Q9JM58 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Crlf1Q9JM58 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crlf1Q9JM58 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crlf1Q9JM58 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crlf1Q9JM58 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crlf1Q9JM58 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crlf1Q9JM58 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Crlf1Q9JM58 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crlf1Q9JM58 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crlf1Q9JM58 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Crlf1Q9JM58 Serp2-204ENSMUST00000228055 705 ntBASIC18.56■□□□□ 0.56
Crlf1Q9JM58 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crlf1Q9JM58 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Crlf1Q9JM58 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crlf1Q9JM58 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crlf1Q9JM58 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Crlf1Q9JM58 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.54■□□□□ 0.56
Crlf1Q9JM58 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crlf1Q9JM58 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Crlf1Q9JM58 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Crlf1Q9JM58 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Crlf1Q9JM58 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Crlf1Q9JM58 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Crlf1Q9JM58 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crlf1Q9JM58 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Crlf1Q9JM58 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Crlf1Q9JM58 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Crlf1Q9JM58 Etf1-202ENSMUST00000180351 108 ntBASIC18.48■□□□□ 0.55
Crlf1Q9JM58 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Crlf1Q9JM58 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.48■□□□□ 0.55
Crlf1Q9JM58 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Crlf1Q9JM58 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crlf1Q9JM58 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.46■□□□□ 0.55
Crlf1Q9JM58 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.45■□□□□ 0.54
Crlf1Q9JM58 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.45■□□□□ 0.54
Crlf1Q9JM58 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.44■□□□□ 0.54
Crlf1Q9JM58 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Crlf1Q9JM58 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Crlf1Q9JM58 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crlf1Q9JM58 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crlf1Q9JM58 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crlf1Q9JM58 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crlf1Q9JM58 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crlf1Q9JM58 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Crlf1Q9JM58 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Crlf1Q9JM58 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Crlf1Q9JM58 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crlf1Q9JM58 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Crlf1Q9JM58 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crlf1Q9JM58 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms