Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cml3Q9JIY8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cml3Q9JIY8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cml3Q9JIY8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cml3Q9JIY8 Gm24970-201ENSMUST00000175582 82 ntBASIC17.26■□□□□ 0.35
Cml3Q9JIY8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
Cml3Q9JIY8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cml3Q9JIY8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cml3Q9JIY8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cml3Q9JIY8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cml3Q9JIY8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cml3Q9JIY8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Gm9397-201ENSMUST00000200125 605 ntBASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cml3Q9JIY8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.23■□□□□ 0.35
Cml3Q9JIY8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cml3Q9JIY8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Particl-201ENSMUST00000205370 1560 ntBASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cml3Q9JIY8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cml3Q9JIY8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cml3Q9JIY8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cml3Q9JIY8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cml3Q9JIY8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.19■□□□□ 0.34
Cml3Q9JIY8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cml3Q9JIY8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cml3Q9JIY8 Gm30023-201ENSMUST00000197970 889 ntBASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cml3Q9JIY8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cml3Q9JIY8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cml3Q9JIY8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cml3Q9JIY8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cml3Q9JIY8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cml3Q9JIY8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.14■□□□□ 0.33
Cml3Q9JIY8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cml3Q9JIY8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cml3Q9JIY8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms