Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim39Q9ESN2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim39Q9ESN2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim39Q9ESN2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim39Q9ESN2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim39Q9ESN2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim39Q9ESN2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim39Q9ESN2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim39Q9ESN2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Trim39Q9ESN2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim39Q9ESN2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim39Q9ESN2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim39Q9ESN2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim39Q9ESN2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim39Q9ESN2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim39Q9ESN2 Particl-201ENSMUST00000205370 1560 ntBASIC20.92■□□□□ 0.94
Trim39Q9ESN2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim39Q9ESN2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim39Q9ESN2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim39Q9ESN2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim39Q9ESN2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim39Q9ESN2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim39Q9ESN2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim39Q9ESN2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim39Q9ESN2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim39Q9ESN2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim39Q9ESN2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim39Q9ESN2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim39Q9ESN2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim39Q9ESN2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim39Q9ESN2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim39Q9ESN2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim39Q9ESN2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim39Q9ESN2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim39Q9ESN2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim39Q9ESN2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim39Q9ESN2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim39Q9ESN2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim39Q9ESN2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim39Q9ESN2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim39Q9ESN2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim39Q9ESN2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.85■□□□□ 0.93
Trim39Q9ESN2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim39Q9ESN2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim39Q9ESN2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim39Q9ESN2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim39Q9ESN2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim39Q9ESN2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim39Q9ESN2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim39Q9ESN2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim39Q9ESN2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trim39Q9ESN2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim39Q9ESN2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim39Q9ESN2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim39Q9ESN2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim39Q9ESN2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim39Q9ESN2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim39Q9ESN2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim39Q9ESN2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim39Q9ESN2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim39Q9ESN2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim39Q9ESN2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim39Q9ESN2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
Trim39Q9ESN2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim39Q9ESN2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim39Q9ESN2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim39Q9ESN2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.77■□□□□ 0.92
Trim39Q9ESN2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim39Q9ESN2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim39Q9ESN2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim39Q9ESN2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim39Q9ESN2 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.76■□□□□ 0.91
Trim39Q9ESN2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim39Q9ESN2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim39Q9ESN2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim39Q9ESN2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim39Q9ESN2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms