Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Rrp8Q9DB85 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rrp8Q9DB85 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.49■■□□□ 1.19
Rrp8Q9DB85 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.48■■□□□ 1.19
Rrp8Q9DB85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Gm15546-201ENSMUST00000122095 826 ntBASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rrp8Q9DB85 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Gm22567-201ENSMUST00000175542 342 ntBASIC22.46■■□□□ 1.19
Rrp8Q9DB85 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rrp8Q9DB85 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rrp8Q9DB85 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.43■■□□□ 1.18
Rrp8Q9DB85 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.42■■□□□ 1.18
Rrp8Q9DB85 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Rrp8Q9DB85 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rrp8Q9DB85 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rrp8Q9DB85 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rrp8Q9DB85 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rrp8Q9DB85 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rrp8Q9DB85 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.37■■□□□ 1.17
Rrp8Q9DB85 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rrp8Q9DB85 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Rrp8Q9DB85 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rrp8Q9DB85 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rrp8Q9DB85 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rrp8Q9DB85 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rrp8Q9DB85 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Gm15039-201ENSMUST00000118914 875 ntBASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.29■■□□□ 1.16
Rrp8Q9DB85 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.28■■□□□ 1.16
Rrp8Q9DB85 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.28■■□□□ 1.16
Rrp8Q9DB85 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rrp8Q9DB85 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rrp8Q9DB85 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Gm15820-201ENSMUST00000201566 728 ntBASIC22.26■■□□□ 1.15
Rrp8Q9DB85 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.25■■□□□ 1.15
Rrp8Q9DB85 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms