Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd3l1Q9D9H3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.81■□□□□ 0.76
Mbd3l1Q9D9H3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Mbd3l1Q9D9H3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mbd3l1Q9D9H3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mbd3l1Q9D9H3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mbd3l1Q9D9H3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Mbd3l1Q9D9H3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd3l1Q9D9H3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd3l1Q9D9H3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mbd3l1Q9D9H3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mbd3l1Q9D9H3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mbd3l1Q9D9H3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd3l1Q9D9H3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd3l1Q9D9H3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Mbd3l1Q9D9H3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mbd3l1Q9D9H3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Mbd3l1Q9D9H3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd3l1Q9D9H3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mbd3l1Q9D9H3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.74■□□□□ 0.75
Mbd3l1Q9D9H3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Mbd3l1Q9D9H3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Mbd3l1Q9D9H3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mbd3l1Q9D9H3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mbd3l1Q9D9H3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mbd3l1Q9D9H3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mbd3l1Q9D9H3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mbd3l1Q9D9H3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd3l1Q9D9H3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.7■□□□□ 0.74
Mbd3l1Q9D9H3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd3l1Q9D9H3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mbd3l1Q9D9H3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mbd3l1Q9D9H3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.69■□□□□ 0.74
Mbd3l1Q9D9H3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mbd3l1Q9D9H3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd3l1Q9D9H3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mbd3l1Q9D9H3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd3l1Q9D9H3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mbd3l1Q9D9H3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Rab21-202ENSMUST00000218831 843 ntBASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mbd3l1Q9D9H3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Mbd3l1Q9D9H3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mbd3l1Q9D9H3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.65■□□□□ 0.74
Mbd3l1Q9D9H3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Mbd3l1Q9D9H3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mbd3l1Q9D9H3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mbd3l1Q9D9H3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Mbd3l1Q9D9H3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mbd3l1Q9D9H3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mbd3l1Q9D9H3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Mbd3l1Q9D9H3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mbd3l1Q9D9H3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mbd3l1Q9D9H3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms