Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.62■□□□□ 0.89
Shisa5Q9D7I0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Shisa5Q9D7I0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shisa5Q9D7I0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.61■□□□□ 0.89
Shisa5Q9D7I0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa5Q9D7I0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa5Q9D7I0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.61■□□□□ 0.89
Shisa5Q9D7I0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.61■□□□□ 0.89
Shisa5Q9D7I0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa5Q9D7I0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.6■□□□□ 0.89
Shisa5Q9D7I0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.6■□□□□ 0.89
Shisa5Q9D7I0 Gm6311-201ENSMUST00000073790 878 ntBASIC20.6■□□□□ 0.89
Shisa5Q9D7I0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa5Q9D7I0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Shisa5Q9D7I0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Shisa5Q9D7I0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Shisa5Q9D7I0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Shisa5Q9D7I0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa5Q9D7I0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.58■□□□□ 0.88
Shisa5Q9D7I0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Shisa5Q9D7I0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa5Q9D7I0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 Gm11175-201ENSMUST00000116172 543 ntBASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa5Q9D7I0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa5Q9D7I0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.55■□□□□ 0.88
Shisa5Q9D7I0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa5Q9D7I0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa5Q9D7I0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa5Q9D7I0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa5Q9D7I0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa5Q9D7I0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa5Q9D7I0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa5Q9D7I0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.51■□□□□ 0.87
Shisa5Q9D7I0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa5Q9D7I0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa5Q9D7I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Shisa5Q9D7I0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa5Q9D7I0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa5Q9D7I0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa5Q9D7I0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa5Q9D7I0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa5Q9D7I0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa5Q9D7I0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa5Q9D7I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa5Q9D7I0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa5Q9D7I0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa5Q9D7I0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa5Q9D7I0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa5Q9D7I0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.46■□□□□ 0.87
Shisa5Q9D7I0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa5Q9D7I0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.46■□□□□ 0.87
Shisa5Q9D7I0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa5Q9D7I0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa5Q9D7I0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa5Q9D7I0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa5Q9D7I0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa5Q9D7I0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa5Q9D7I0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa5Q9D7I0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.44■□□□□ 0.86
Shisa5Q9D7I0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa5Q9D7I0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa5Q9D7I0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Shisa5Q9D7I0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms