Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.61■■□□□ 1.37
Rnf135Q9CWS1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rnf135Q9CWS1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf135Q9CWS1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf135Q9CWS1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.6■■□□□ 1.37
Rnf135Q9CWS1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Rnf135Q9CWS1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf135Q9CWS1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf135Q9CWS1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf135Q9CWS1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Gm37136-201ENSMUST00000194368 194 ntBASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf135Q9CWS1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf135Q9CWS1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.57■■□□□ 1.36
Rnf135Q9CWS1 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.57■■□□□ 1.36
Rnf135Q9CWS1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf135Q9CWS1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rnf135Q9CWS1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf135Q9CWS1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.56■■□□□ 1.36
Rnf135Q9CWS1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf135Q9CWS1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf135Q9CWS1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.54■■□□□ 1.36
Rnf135Q9CWS1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf135Q9CWS1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf135Q9CWS1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf135Q9CWS1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf135Q9CWS1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rnf135Q9CWS1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rnf135Q9CWS1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.52■■□□□ 1.36
Rnf135Q9CWS1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.35
Rnf135Q9CWS1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf135Q9CWS1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf135Q9CWS1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Rnf135Q9CWS1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf135Q9CWS1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf135Q9CWS1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf135Q9CWS1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.49■■□□□ 1.35
Rnf135Q9CWS1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf135Q9CWS1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Rnf135Q9CWS1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf135Q9CWS1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf135Q9CWS1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf135Q9CWS1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf135Q9CWS1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf135Q9CWS1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf135Q9CWS1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf135Q9CWS1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf135Q9CWS1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf135Q9CWS1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.45■■□□□ 1.35
Rnf135Q9CWS1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf135Q9CWS1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf135Q9CWS1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf135Q9CWS1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rnf135Q9CWS1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf135Q9CWS1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf135Q9CWS1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf135Q9CWS1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf135Q9CWS1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.41■■□□□ 1.34
Rnf135Q9CWS1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf135Q9CWS1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf135Q9CWS1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf135Q9CWS1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf135Q9CWS1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf135Q9CWS1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.39■■□□□ 1.33
Rnf135Q9CWS1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf135Q9CWS1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf135Q9CWS1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf135Q9CWS1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.38■■□□□ 1.33
Rnf135Q9CWS1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf135Q9CWS1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf135Q9CWS1 Mir6538-201ENSMUST00000183713 110 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms