Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim16Q99PP9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim16Q99PP9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim16Q99PP9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Trim16Q99PP9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim16Q99PP9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim16Q99PP9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim16Q99PP9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trim16Q99PP9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim16Q99PP9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim16Q99PP9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim16Q99PP9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim16Q99PP9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.95■■□□□ 1.1
Trim16Q99PP9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim16Q99PP9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim16Q99PP9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim16Q99PP9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim16Q99PP9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim16Q99PP9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim16Q99PP9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim16Q99PP9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim16Q99PP9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.91■■□□□ 1.1
Trim16Q99PP9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim16Q99PP9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim16Q99PP9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim16Q99PP9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim16Q99PP9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim16Q99PP9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim16Q99PP9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim16Q99PP9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim16Q99PP9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.89■■□□□ 1.09
Trim16Q99PP9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim16Q99PP9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Trim16Q99PP9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Trim16Q99PP9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim16Q99PP9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim16Q99PP9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim16Q99PP9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim16Q99PP9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim16Q99PP9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim16Q99PP9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim16Q99PP9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.86■■□□□ 1.09
Trim16Q99PP9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim16Q99PP9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim16Q99PP9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim16Q99PP9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Trim16Q99PP9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim16Q99PP9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim16Q99PP9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim16Q99PP9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Trim16Q99PP9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim16Q99PP9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Trim16Q99PP9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim16Q99PP9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim16Q99PP9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim16Q99PP9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.81■■□□□ 1.08
Trim16Q99PP9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim16Q99PP9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Trim16Q99PP9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.8■■□□□ 1.08
Trim16Q99PP9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim16Q99PP9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim16Q99PP9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim16Q99PP9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim16Q99PP9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim16Q99PP9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.79■■□□□ 1.08
Trim16Q99PP9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim16Q99PP9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim16Q99PP9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim16Q99PP9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trim16Q99PP9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim16Q99PP9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim16Q99PP9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim16Q99PP9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim16Q99PP9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim16Q99PP9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim16Q99PP9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.76■■□□□ 1.07
Trim16Q99PP9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim16Q99PP9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim16Q99PP9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.75■■□□□ 1.07
Trim16Q99PP9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim16Q99PP9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim16Q99PP9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms