Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Smarcd2Q99JR8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Smarcd2Q99JR8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Smarcd2Q99JR8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Amer2-203ENSMUST00000225247 2662 ntBASIC23.4■■□□□ 1.34
Smarcd2Q99JR8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Smarcd2Q99JR8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Smarcd2Q99JR8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smarcd2Q99JR8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Smarcd2Q99JR8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Smarcd2Q99JR8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Smarcd2Q99JR8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smarcd2Q99JR8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Smarcd2Q99JR8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.37■■□□□ 1.33
Smarcd2Q99JR8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Smarcd2Q99JR8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smarcd2Q99JR8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcd2Q99JR8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.35■■□□□ 1.33
Smarcd2Q99JR8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcd2Q99JR8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Smarcd2Q99JR8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcd2Q99JR8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcd2Q99JR8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcd2Q99JR8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.33■■□□□ 1.33
Smarcd2Q99JR8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smarcd2Q99JR8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smarcd2Q99JR8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Smarcd2Q99JR8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smarcd2Q99JR8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Smarcd2Q99JR8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcd2Q99JR8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcd2Q99JR8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcd2Q99JR8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcd2Q99JR8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smarcd2Q99JR8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Smarcd2Q99JR8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Smarcd2Q99JR8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smarcd2Q99JR8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smarcd2Q99JR8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Smarcd2Q99JR8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcd2Q99JR8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcd2Q99JR8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Smarcd2Q99JR8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcd2Q99JR8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Smarcd2Q99JR8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcd2Q99JR8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.26■■□□□ 1.31
Smarcd2Q99JR8 Gm15546-201ENSMUST00000122095 826 ntBASIC23.26■■□□□ 1.31
Smarcd2Q99JR8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcd2Q99JR8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcd2Q99JR8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.25■■□□□ 1.31
Smarcd2Q99JR8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smarcd2Q99JR8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.25■■□□□ 1.31
Smarcd2Q99JR8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smarcd2Q99JR8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Smarcd2Q99JR8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Smarcd2Q99JR8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smarcd2Q99JR8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.23■■□□□ 1.31
Smarcd2Q99JR8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.23■■□□□ 1.31
Smarcd2Q99JR8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smarcd2Q99JR8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smarcd2Q99JR8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Smarcd2Q99JR8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.21■■□□□ 1.31
Smarcd2Q99JR8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcd2Q99JR8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcd2Q99JR8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smarcd2Q99JR8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.21■■□□□ 1.31
Smarcd2Q99JR8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Gm22567-201ENSMUST00000175542 342 ntBASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarcd2Q99JR8 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.18■■□□□ 1.3
Smarcd2Q99JR8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smarcd2Q99JR8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Smarcd2Q99JR8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.16■■□□□ 1.3
Smarcd2Q99JR8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Smarcd2Q99JR8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcd2Q99JR8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcd2Q99JR8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcd2Q99JR8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Smarcd2Q99JR8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smarcd2Q99JR8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Smarcd2Q99JR8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smarcd2Q99JR8 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.14■■□□□ 1.29
Smarcd2Q99JR8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Smarcd2Q99JR8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.12■■□□□ 1.29
Smarcd2Q99JR8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smarcd2Q99JR8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smarcd2Q99JR8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.11■■□□□ 1.29
Smarcd2Q99JR8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms