Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm15546-201ENSMUST00000122095 826 ntBASIC26.57■■□□□ 1.84
Rfc4Q99J62 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.57■■□□□ 1.84
Rfc4Q99J62 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rfc4Q99J62 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.56■■□□□ 1.84
Rfc4Q99J62 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Rfc4Q99J62 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rfc4Q99J62 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rfc4Q99J62 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rfc4Q99J62 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rfc4Q99J62 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.55■■□□□ 1.84
Rfc4Q99J62 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Rfc4Q99J62 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rfc4Q99J62 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rfc4Q99J62 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rfc4Q99J62 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rfc4Q99J62 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.53■■□□□ 1.84
Rfc4Q99J62 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Rfc4Q99J62 Gm44428-201ENSMUST00000204474 874 ntBASIC26.52■■□□□ 1.84
Rfc4Q99J62 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rfc4Q99J62 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rfc4Q99J62 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.5■■□□□ 1.83
Rfc4Q99J62 Gm15039-201ENSMUST00000118914 875 ntBASIC26.5■■□□□ 1.83
Rfc4Q99J62 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rfc4Q99J62 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rfc4Q99J62 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Rfc4Q99J62 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rfc4Q99J62 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rfc4Q99J62 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.48■■□□□ 1.83
Rfc4Q99J62 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Rfc4Q99J62 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Rfc4Q99J62 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rfc4Q99J62 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rfc4Q99J62 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rfc4Q99J62 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rfc4Q99J62 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.46■■□□□ 1.83
Rfc4Q99J62 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Rfc4Q99J62 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rfc4Q99J62 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rfc4Q99J62 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Rfc4Q99J62 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.45■■□□□ 1.82
Rfc4Q99J62 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.44■■□□□ 1.82
Rfc4Q99J62 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.43■■□□□ 1.82
Rfc4Q99J62 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rfc4Q99J62 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Rfc4Q99J62 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rfc4Q99J62 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rfc4Q99J62 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rfc4Q99J62 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rfc4Q99J62 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rfc4Q99J62 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.4■■□□□ 1.82
Rfc4Q99J62 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rfc4Q99J62 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rfc4Q99J62 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rfc4Q99J62 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rfc4Q99J62 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rfc4Q99J62 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rfc4Q99J62 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Rfc4Q99J62 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Rfc4Q99J62 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rfc4Q99J62 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rfc4Q99J62 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rfc4Q99J62 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Rfc4Q99J62 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfc4Q99J62 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfc4Q99J62 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfc4Q99J62 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rfc4Q99J62 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rfc4Q99J62 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rfc4Q99J62 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.33■■□□□ 1.81
Rfc4Q99J62 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rfc4Q99J62 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rfc4Q99J62 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.32■■□□□ 1.8
Rfc4Q99J62 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Rfc4Q99J62 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.32■■□□□ 1.8
Rfc4Q99J62 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.31■■□□□ 1.8
Rfc4Q99J62 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Rfc4Q99J62 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Rfc4Q99J62 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Rfc4Q99J62 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rfc4Q99J62 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rfc4Q99J62 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rfc4Q99J62 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Rfc4Q99J62 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rfc4Q99J62 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.29■■□□□ 1.8
Rfc4Q99J62 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.29■■□□□ 1.8
Rfc4Q99J62 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Rfc4Q99J62 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.28■■□□□ 1.8
Rfc4Q99J62 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.28■■□□□ 1.8
Rfc4Q99J62 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.28■■□□□ 1.8
Rfc4Q99J62 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfc4Q99J62 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rfc4Q99J62 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfc4Q99J62 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Rfc4Q99J62 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rfc4Q99J62 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms