Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhb6Q91XZ4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb6Q91XZ4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb6Q91XZ4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb6Q91XZ4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb6Q91XZ4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb6Q91XZ4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhb6Q91XZ4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhb6Q91XZ4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Mir3960-201ENSMUST00000198213 73 ntBASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Gm9812-201ENSMUST00000061934 968 ntBASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb6Q91XZ4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb6Q91XZ4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb6Q91XZ4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb6Q91XZ4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhb6Q91XZ4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhb6Q91XZ4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Pcdhb6Q91XZ4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb6Q91XZ4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhb6Q91XZ4 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.41■■□□□ 1.34
Pcdhb6Q91XZ4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Pcdhb6Q91XZ4 Gm45364-201ENSMUST00000210883 159 ntBASIC23.41■■□□□ 1.34
Pcdhb6Q91XZ4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Pcdhb6Q91XZ4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhb6Q91XZ4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb6Q91XZ4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhb6Q91XZ4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.34
Pcdhb6Q91XZ4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Pcdhb6Q91XZ4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhb6Q91XZ4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhb6Q91XZ4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.39■■□□□ 1.33
Pcdhb6Q91XZ4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb6Q91XZ4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb6Q91XZ4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhb6Q91XZ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Pcdhb6Q91XZ4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhb6Q91XZ4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.37■■□□□ 1.33
Pcdhb6Q91XZ4 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.37■■□□□ 1.33
Pcdhb6Q91XZ4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhb6Q91XZ4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.36■■□□□ 1.33
Pcdhb6Q91XZ4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb6Q91XZ4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhb6Q91XZ4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Pcdhb6Q91XZ4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.35■■□□□ 1.33
Pcdhb6Q91XZ4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
Pcdhb6Q91XZ4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb6Q91XZ4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.34■■□□□ 1.33
Pcdhb6Q91XZ4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhb6Q91XZ4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.33■■□□□ 1.33
Pcdhb6Q91XZ4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhb6Q91XZ4 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.33■■□□□ 1.33
Pcdhb6Q91XZ4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhb6Q91XZ4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Pcdhb6Q91XZ4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhb6Q91XZ4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhb6Q91XZ4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.31■■□□□ 1.32
Pcdhb6Q91XZ4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.3■■□□□ 1.32
Pcdhb6Q91XZ4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhb6Q91XZ4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb6Q91XZ4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhb6Q91XZ4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb6Q91XZ4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.28■■□□□ 1.32
Pcdhb6Q91XZ4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb6Q91XZ4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb6Q91XZ4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb6Q91XZ4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb6Q91XZ4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb6Q91XZ4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb6Q91XZ4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb6Q91XZ4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb6Q91XZ4 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.24■■□□□ 1.31
Pcdhb6Q91XZ4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb6Q91XZ4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.23■■□□□ 1.31
Pcdhb6Q91XZ4 Terc-201ENSMUST00000082862 423 ntBASIC23.23■■□□□ 1.31
Pcdhb6Q91XZ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdhb6Q91XZ4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb6Q91XZ4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb6Q91XZ4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdhb6Q91XZ4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb6Q91XZ4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb6Q91XZ4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb6Q91XZ4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb6Q91XZ4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms