Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Gm5921-201ENSMUST00000075898 882 ntBASIC24.08■■□□□ 1.45
Rsph1Q8VIG3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.08■■□□□ 1.44
Rsph1Q8VIG3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rsph1Q8VIG3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rsph1Q8VIG3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rsph1Q8VIG3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Rsph1Q8VIG3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rsph1Q8VIG3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Rsph1Q8VIG3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rsph1Q8VIG3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rsph1Q8VIG3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rsph1Q8VIG3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rsph1Q8VIG3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rsph1Q8VIG3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rsph1Q8VIG3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.01■■□□□ 1.43
Rsph1Q8VIG3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rsph1Q8VIG3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rsph1Q8VIG3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rsph1Q8VIG3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rsph1Q8VIG3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.99■■□□□ 1.43
Rsph1Q8VIG3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rsph1Q8VIG3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rsph1Q8VIG3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.97■■□□□ 1.43
Rsph1Q8VIG3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rsph1Q8VIG3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rsph1Q8VIG3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rsph1Q8VIG3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.96■■□□□ 1.43
Rsph1Q8VIG3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.95■■□□□ 1.42
Rsph1Q8VIG3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rsph1Q8VIG3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rsph1Q8VIG3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Rsph1Q8VIG3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Gm5812-201ENSMUST00000061073 957 ntBASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rsph1Q8VIG3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rsph1Q8VIG3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rsph1Q8VIG3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rsph1Q8VIG3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rsph1Q8VIG3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rsph1Q8VIG3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rsph1Q8VIG3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rsph1Q8VIG3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Rsph1Q8VIG3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rsph1Q8VIG3 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.89■■□□□ 1.41
Rsph1Q8VIG3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
Rsph1Q8VIG3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rsph1Q8VIG3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.88■■□□□ 1.41
Rsph1Q8VIG3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
Rsph1Q8VIG3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rsph1Q8VIG3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rsph1Q8VIG3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.85■■□□□ 1.41
Rsph1Q8VIG3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.85■■□□□ 1.41
Rsph1Q8VIG3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rsph1Q8VIG3 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.83■■□□□ 1.41
Rsph1Q8VIG3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rsph1Q8VIG3 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rsph1Q8VIG3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rsph1Q8VIG3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rsph1Q8VIG3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rsph1Q8VIG3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rsph1Q8VIG3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rsph1Q8VIG3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rsph1Q8VIG3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rsph1Q8VIG3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rsph1Q8VIG3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Rsph1Q8VIG3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.77■■□□□ 1.4
Rsph1Q8VIG3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rsph1Q8VIG3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rsph1Q8VIG3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rsph1Q8VIG3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.76■■□□□ 1.39
Rsph1Q8VIG3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rsph1Q8VIG3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rsph1Q8VIG3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Rsph1Q8VIG3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms