Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab40bQ8VHP8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab40bQ8VHP8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rab40bQ8VHP8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Rab40bQ8VHP8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab40bQ8VHP8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.45■□□□□ 0.86
Rab40bQ8VHP8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab40bQ8VHP8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.45■□□□□ 0.86
Rab40bQ8VHP8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab40bQ8VHP8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab40bQ8VHP8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab40bQ8VHP8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab40bQ8VHP8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab40bQ8VHP8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rab40bQ8VHP8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.42■□□□□ 0.86
Rab40bQ8VHP8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab40bQ8VHP8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Rab40bQ8VHP8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rab40bQ8VHP8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.4■□□□□ 0.86
Rab40bQ8VHP8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab40bQ8VHP8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab40bQ8VHP8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab40bQ8VHP8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab40bQ8VHP8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab40bQ8VHP8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab40bQ8VHP8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rab40bQ8VHP8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rab40bQ8VHP8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.37■□□□□ 0.85
Rab40bQ8VHP8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab40bQ8VHP8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab40bQ8VHP8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rab40bQ8VHP8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rab40bQ8VHP8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab40bQ8VHP8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab40bQ8VHP8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rab40bQ8VHP8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab40bQ8VHP8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab40bQ8VHP8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rab40bQ8VHP8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab40bQ8VHP8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab40bQ8VHP8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab40bQ8VHP8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rab40bQ8VHP8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rab40bQ8VHP8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab40bQ8VHP8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rab40bQ8VHP8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab40bQ8VHP8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rab40bQ8VHP8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rab40bQ8VHP8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab40bQ8VHP8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab40bQ8VHP8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab40bQ8VHP8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab40bQ8VHP8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rab40bQ8VHP8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rab40bQ8VHP8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab40bQ8VHP8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms