Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Ddx39aQ8VDW0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ddx39aQ8VDW0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx39aQ8VDW0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.45■■□□□ 1.66
Ddx39aQ8VDW0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx39aQ8VDW0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.45■■□□□ 1.66
Ddx39aQ8VDW0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Ddx39aQ8VDW0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx39aQ8VDW0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx39aQ8VDW0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.43■■□□□ 1.66
Ddx39aQ8VDW0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Ddx39aQ8VDW0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx39aQ8VDW0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.42■■□□□ 1.66
Ddx39aQ8VDW0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.42■■□□□ 1.66
Ddx39aQ8VDW0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx39aQ8VDW0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx39aQ8VDW0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Ddx39aQ8VDW0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx39aQ8VDW0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.4■■□□□ 1.66
Ddx39aQ8VDW0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx39aQ8VDW0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx39aQ8VDW0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx39aQ8VDW0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx39aQ8VDW0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx39aQ8VDW0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx39aQ8VDW0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx39aQ8VDW0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx39aQ8VDW0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx39aQ8VDW0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx39aQ8VDW0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ddx39aQ8VDW0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx39aQ8VDW0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx39aQ8VDW0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx39aQ8VDW0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ddx39aQ8VDW0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx39aQ8VDW0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx39aQ8VDW0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx39aQ8VDW0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx39aQ8VDW0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.34■■□□□ 1.65
Ddx39aQ8VDW0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx39aQ8VDW0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx39aQ8VDW0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.34■■□□□ 1.65
Ddx39aQ8VDW0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx39aQ8VDW0 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.33■■□□□ 1.65
Ddx39aQ8VDW0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Ddx39aQ8VDW0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.64
Ddx39aQ8VDW0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.32■■□□□ 1.64
Ddx39aQ8VDW0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx39aQ8VDW0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.32■■□□□ 1.64
Ddx39aQ8VDW0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx39aQ8VDW0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx39aQ8VDW0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx39aQ8VDW0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx39aQ8VDW0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ddx39aQ8VDW0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx39aQ8VDW0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ddx39aQ8VDW0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.3■■□□□ 1.64
Ddx39aQ8VDW0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx39aQ8VDW0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx39aQ8VDW0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx39aQ8VDW0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx39aQ8VDW0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx39aQ8VDW0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx39aQ8VDW0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.27■■□□□ 1.64
Ddx39aQ8VDW0 Gm10420-201ENSMUST00000121713 882 ntBASIC25.27■■□□□ 1.64
Ddx39aQ8VDW0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.26■■□□□ 1.63
Ddx39aQ8VDW0 Gm44428-201ENSMUST00000204474 874 ntBASIC25.26■■□□□ 1.63
Ddx39aQ8VDW0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Ddx39aQ8VDW0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.26■■□□□ 1.63
Ddx39aQ8VDW0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Ddx39aQ8VDW0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.25■■□□□ 1.63
Ddx39aQ8VDW0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx39aQ8VDW0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Ddx39aQ8VDW0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx39aQ8VDW0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx39aQ8VDW0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx39aQ8VDW0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Ddx39aQ8VDW0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx39aQ8VDW0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.22■■□□□ 1.63
Ddx39aQ8VDW0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx39aQ8VDW0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx39aQ8VDW0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx39aQ8VDW0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx39aQ8VDW0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Ddx39aQ8VDW0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.2■■□□□ 1.62
Ddx39aQ8VDW0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx39aQ8VDW0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx39aQ8VDW0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx39aQ8VDW0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms