Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC35.15■■■■□ 3.22
Abca8bQ8K440 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Abca8bQ8K440 Rps24-207ENSMUST00000224568 714 ntBASIC35.15■■■■□ 3.22
Abca8bQ8K440 Gm43592-201ENSMUST00000196922 1165 ntBASIC35.14■■■■□ 3.22
Abca8bQ8K440 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Abca8bQ8K440 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC35.13■■■■□ 3.21
Abca8bQ8K440 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC35.13■■■■□ 3.21
Abca8bQ8K440 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Abca8bQ8K440 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Abca8bQ8K440 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
Abca8bQ8K440 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Abca8bQ8K440 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC35.12■■■■□ 3.21
Abca8bQ8K440 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC35.1■■■■□ 3.21
Abca8bQ8K440 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Abca8bQ8K440 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC35.1■■■■□ 3.21
Abca8bQ8K440 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Abca8bQ8K440 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC35.1■■■■□ 3.21
Abca8bQ8K440 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Abca8bQ8K440 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Abca8bQ8K440 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC35.08■■■■□ 3.21
Abca8bQ8K440 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Abca8bQ8K440 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Abca8bQ8K440 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Abca8bQ8K440 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
Abca8bQ8K440 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Abca8bQ8K440 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Abca8bQ8K440 Gm14117-201ENSMUST00000122417 843 ntBASIC35.04■■■■□ 3.2
Abca8bQ8K440 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Abca8bQ8K440 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
Abca8bQ8K440 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Abca8bQ8K440 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Abca8bQ8K440 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC35■■■■□ 3.19
Abca8bQ8K440 Gm45102-201ENSMUST00000207427 857 ntBASIC35■■■■□ 3.19
Abca8bQ8K440 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Abca8bQ8K440 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Abca8bQ8K440 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Abca8bQ8K440 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Abca8bQ8K440 Nsd1-203ENSMUST00000224156 1149 ntBASIC34.99■■■■□ 3.19
Abca8bQ8K440 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Abca8bQ8K440 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC34.97■■■■□ 3.19
Abca8bQ8K440 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
Abca8bQ8K440 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Abca8bQ8K440 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC34.95■■■■□ 3.18
Abca8bQ8K440 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Abca8bQ8K440 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC34.94■■■■□ 3.18
Abca8bQ8K440 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Abca8bQ8K440 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC34.93■■■■□ 3.18
Abca8bQ8K440 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC34.93■■■■□ 3.18
Abca8bQ8K440 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC34.93■■■■□ 3.18
Abca8bQ8K440 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
Abca8bQ8K440 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC34.92■■■■□ 3.18
Abca8bQ8K440 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
Abca8bQ8K440 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC34.92■■■■□ 3.18
Abca8bQ8K440 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Abca8bQ8K440 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Abca8bQ8K440 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Abca8bQ8K440 Gm37847-201ENSMUST00000192163 1497 ntBASIC34.89■■■■□ 3.18
Abca8bQ8K440 Gm31748-201ENSMUST00000194938 1497 ntBASIC34.89■■■■□ 3.18
Abca8bQ8K440 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Abca8bQ8K440 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Abca8bQ8K440 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Abca8bQ8K440 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Abca8bQ8K440 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Abca8bQ8K440 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Abca8bQ8K440 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
Abca8bQ8K440 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC34.86■■■■□ 3.17
Abca8bQ8K440 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Abca8bQ8K440 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Abca8bQ8K440 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC34.84■■■■□ 3.17
Abca8bQ8K440 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Abca8bQ8K440 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Abca8bQ8K440 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
Abca8bQ8K440 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC34.83■■■■□ 3.17
Abca8bQ8K440 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC34.82■■■■□ 3.16
Abca8bQ8K440 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Abca8bQ8K440 Zxda-201ENSMUST00000117281 2621 ntBASIC34.81■■■■□ 3.16
Abca8bQ8K440 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Abca8bQ8K440 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC34.81■■■■□ 3.16
Abca8bQ8K440 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC34.8■■■■□ 3.16
Abca8bQ8K440 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Abca8bQ8K440 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Abca8bQ8K440 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
Abca8bQ8K440 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Abca8bQ8K440 Gm9959-201ENSMUST00000068277 390 ntBASIC34.77■■■■□ 3.16
Abca8bQ8K440 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Abca8bQ8K440 Gm43445-201ENSMUST00000198564 2091 ntBASIC34.77■■■■□ 3.16
Abca8bQ8K440 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Abca8bQ8K440 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
Abca8bQ8K440 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Abca8bQ8K440 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC34.74■■■■□ 3.15
Abca8bQ8K440 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC34.73■■■■□ 3.15
Abca8bQ8K440 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Abca8bQ8K440 Gm4419-202ENSMUST00000226239 1431 ntBASIC34.72■■■■□ 3.15
Abca8bQ8K440 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Abca8bQ8K440 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms