Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trpm6Q8CIR4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.24■■□□□ 1.31
Trpm6Q8CIR4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trpm6Q8CIR4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trpm6Q8CIR4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.24■■□□□ 1.31
Trpm6Q8CIR4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.23■■□□□ 1.31
Trpm6Q8CIR4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trpm6Q8CIR4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Gm5921-201ENSMUST00000075898 882 ntBASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trpm6Q8CIR4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.2■■□□□ 1.3
Trpm6Q8CIR4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trpm6Q8CIR4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trpm6Q8CIR4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trpm6Q8CIR4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Trpm6Q8CIR4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Trpm6Q8CIR4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trpm6Q8CIR4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trpm6Q8CIR4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trpm6Q8CIR4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trpm6Q8CIR4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trpm6Q8CIR4 Gm5812-201ENSMUST00000061073 957 ntBASIC23.16■■□□□ 1.3
Trpm6Q8CIR4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trpm6Q8CIR4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trpm6Q8CIR4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.13■■□□□ 1.29
Trpm6Q8CIR4 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.13■■□□□ 1.29
Trpm6Q8CIR4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Trpm6Q8CIR4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Trpm6Q8CIR4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trpm6Q8CIR4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trpm6Q8CIR4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.12■■□□□ 1.29
Trpm6Q8CIR4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trpm6Q8CIR4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trpm6Q8CIR4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trpm6Q8CIR4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trpm6Q8CIR4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trpm6Q8CIR4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trpm6Q8CIR4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trpm6Q8CIR4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trpm6Q8CIR4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trpm6Q8CIR4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trpm6Q8CIR4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trpm6Q8CIR4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trpm6Q8CIR4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Trpm6Q8CIR4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Trpm6Q8CIR4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trpm6Q8CIR4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trpm6Q8CIR4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Trpm6Q8CIR4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trpm6Q8CIR4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trpm6Q8CIR4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trpm6Q8CIR4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trpm6Q8CIR4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trpm6Q8CIR4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trpm6Q8CIR4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trpm6Q8CIR4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Trpm6Q8CIR4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.06■■□□□ 1.28
Trpm6Q8CIR4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trpm6Q8CIR4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Trpm6Q8CIR4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.04■■□□□ 1.28
Trpm6Q8CIR4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trpm6Q8CIR4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trpm6Q8CIR4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trpm6Q8CIR4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trpm6Q8CIR4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
Trpm6Q8CIR4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.03■■□□□ 1.28
Trpm6Q8CIR4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trpm6Q8CIR4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trpm6Q8CIR4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trpm6Q8CIR4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Trpm6Q8CIR4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23■■□□□ 1.27
Trpm6Q8CIR4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23■■□□□ 1.27
Trpm6Q8CIR4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trpm6Q8CIR4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Trpm6Q8CIR4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23■■□□□ 1.27
Trpm6Q8CIR4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23■■□□□ 1.27
Trpm6Q8CIR4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trpm6Q8CIR4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trpm6Q8CIR4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trpm6Q8CIR4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trpm6Q8CIR4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trpm6Q8CIR4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.98■■□□□ 1.27
Trpm6Q8CIR4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trpm6Q8CIR4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trpm6Q8CIR4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Trpm6Q8CIR4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms