Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfwd3Q8CIK8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Rfwd3Q8CIK8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.22■□□□□ 0.99
Rfwd3Q8CIK8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfwd3Q8CIK8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfwd3Q8CIK8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.2■□□□□ 0.98
Rfwd3Q8CIK8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rfwd3Q8CIK8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfwd3Q8CIK8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfwd3Q8CIK8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfwd3Q8CIK8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rfwd3Q8CIK8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfwd3Q8CIK8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfwd3Q8CIK8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rfwd3Q8CIK8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.17■□□□□ 0.98
Rfwd3Q8CIK8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfwd3Q8CIK8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.16■□□□□ 0.98
Rfwd3Q8CIK8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfwd3Q8CIK8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rfwd3Q8CIK8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfwd3Q8CIK8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfwd3Q8CIK8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfwd3Q8CIK8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rfwd3Q8CIK8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfwd3Q8CIK8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfwd3Q8CIK8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfwd3Q8CIK8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfwd3Q8CIK8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfwd3Q8CIK8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfwd3Q8CIK8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfwd3Q8CIK8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfwd3Q8CIK8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfwd3Q8CIK8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rfwd3Q8CIK8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfwd3Q8CIK8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Rfwd3Q8CIK8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfwd3Q8CIK8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfwd3Q8CIK8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfwd3Q8CIK8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfwd3Q8CIK8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfwd3Q8CIK8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfwd3Q8CIK8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfwd3Q8CIK8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
Rfwd3Q8CIK8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.06■□□□□ 0.96
Rfwd3Q8CIK8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rfwd3Q8CIK8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Rfwd3Q8CIK8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfwd3Q8CIK8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfwd3Q8CIK8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfwd3Q8CIK8 Terc-201ENSMUST00000082862 423 ntBASIC21.03■□□□□ 0.96
Rfwd3Q8CIK8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms