Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Gm7332-201ENSMUST00000118351 454 ntBASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Gm27502-201ENSMUST00000183495 199 ntBASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf222Q8CEF8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Gm44428-201ENSMUST00000204474 874 ntBASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.46■■□□□ 1.19
Rnf222Q8CEF8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.45■■□□□ 1.18
Rnf222Q8CEF8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf222Q8CEF8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf222Q8CEF8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Rnf222Q8CEF8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf222Q8CEF8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf222Q8CEF8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.42■■□□□ 1.18
Rnf222Q8CEF8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf222Q8CEF8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf222Q8CEF8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Rnf222Q8CEF8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Rnf222Q8CEF8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf222Q8CEF8 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.4■■□□□ 1.18
Rnf222Q8CEF8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rnf222Q8CEF8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf222Q8CEF8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf222Q8CEF8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Rnf222Q8CEF8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf222Q8CEF8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf222Q8CEF8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf222Q8CEF8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf222Q8CEF8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf222Q8CEF8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf222Q8CEF8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.36■■□□□ 1.17
Rnf222Q8CEF8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.36■■□□□ 1.17
Rnf222Q8CEF8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf222Q8CEF8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rnf222Q8CEF8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.35■■□□□ 1.17
Rnf222Q8CEF8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf222Q8CEF8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf222Q8CEF8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rnf222Q8CEF8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.35■■□□□ 1.17
Rnf222Q8CEF8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf222Q8CEF8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf222Q8CEF8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf222Q8CEF8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf222Q8CEF8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.32■■□□□ 1.16
Rnf222Q8CEF8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf222Q8CEF8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.31■■□□□ 1.16
Rnf222Q8CEF8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.3■■□□□ 1.16
Rnf222Q8CEF8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf222Q8CEF8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf222Q8CEF8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf222Q8CEF8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf222Q8CEF8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf222Q8CEF8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf222Q8CEF8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf222Q8CEF8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf222Q8CEF8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf222Q8CEF8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf222Q8CEF8 Gm10420-201ENSMUST00000121713 882 ntBASIC22.27■■□□□ 1.16
Rnf222Q8CEF8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rnf222Q8CEF8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf222Q8CEF8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms