Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30,96■■■□□ 2,55
Col16a1Q8BLX7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30,96■■■□□ 2,55
Col16a1Q8BLX7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC30,96■■■□□ 2,55
Col16a1Q8BLX7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Col16a1Q8BLX7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Col16a1Q8BLX7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30,95■■■□□ 2,54
Col16a1Q8BLX7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC30,95■■■□□ 2,54
Col16a1Q8BLX7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Col16a1Q8BLX7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30,94■■■□□ 2,54
Col16a1Q8BLX7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Col16a1Q8BLX7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC30,94■■■□□ 2,54
Col16a1Q8BLX7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Col16a1Q8BLX7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30,93■■■□□ 2,54
Col16a1Q8BLX7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30,92■■■□□ 2,54
Col16a1Q8BLX7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Col16a1Q8BLX7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Col16a1Q8BLX7 Gm13238-201ENSMUST00000117655 780 ntBASIC30,88■■■□□ 2,53
Col16a1Q8BLX7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Col16a1Q8BLX7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Col16a1Q8BLX7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC30,88■■■□□ 2,53
Col16a1Q8BLX7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30,87■■■□□ 2,53
Col16a1Q8BLX7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30,87■■■□□ 2,53
Col16a1Q8BLX7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30,87■■■□□ 2,53
Col16a1Q8BLX7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30,87■■■□□ 2,53
Col16a1Q8BLX7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Col16a1Q8BLX7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30,85■■■□□ 2,53
Col16a1Q8BLX7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30,85■■■□□ 2,53
Col16a1Q8BLX7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC30,84■■■□□ 2,53
Col16a1Q8BLX7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC30,84■■■□□ 2,53
Col16a1Q8BLX7 Amer2-203ENSMUST00000225247 2662 ntBASIC30,84■■■□□ 2,53
Col16a1Q8BLX7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC30,83■■■□□ 2,53
Col16a1Q8BLX7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30,83■■■□□ 2,53
Col16a1Q8BLX7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30,83■■■□□ 2,53
Col16a1Q8BLX7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30,83■■■□□ 2,53
Col16a1Q8BLX7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Col16a1Q8BLX7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30,82■■■□□ 2,53
Col16a1Q8BLX7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30,82■■■□□ 2,52
Col16a1Q8BLX7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30,82■■■□□ 2,52
Col16a1Q8BLX7 Gm43566-201ENSMUST00000196851 808 ntBASIC30,82■■■□□ 2,52
Col16a1Q8BLX7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Col16a1Q8BLX7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Col16a1Q8BLX7 Gm4419-202ENSMUST00000226239 1431 ntBASIC30,8■■■□□ 2,52
Col16a1Q8BLX7 AC093043.1-201ENSMUST00000226700 898 ntBASIC30,8■■■□□ 2,52
Col16a1Q8BLX7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Col16a1Q8BLX7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC30,79■■■□□ 2,52
Col16a1Q8BLX7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30,79■■■□□ 2,52
Col16a1Q8BLX7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30,79■■■□□ 2,52
Col16a1Q8BLX7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30,79■■■□□ 2,52
Col16a1Q8BLX7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Col16a1Q8BLX7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30,78■■■□□ 2,52
Col16a1Q8BLX7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30,78■■■□□ 2,52
Col16a1Q8BLX7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC30,78■■■□□ 2,52
Col16a1Q8BLX7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC30,78■■■□□ 2,52
Col16a1Q8BLX7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Col16a1Q8BLX7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC30,77■■■□□ 2,52
Col16a1Q8BLX7 Gm44428-201ENSMUST00000204474 874 ntBASIC30,77■■■□□ 2,52
Col16a1Q8BLX7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30,77■■■□□ 2,52
Col16a1Q8BLX7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Col16a1Q8BLX7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30,75■■■□□ 2,51
Col16a1Q8BLX7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30,74■■■□□ 2,51
Col16a1Q8BLX7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Col16a1Q8BLX7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Col16a1Q8BLX7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Col16a1Q8BLX7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC30,72■■■□□ 2,51
Col16a1Q8BLX7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30,72■■■□□ 2,51
Col16a1Q8BLX7 Gm43592-201ENSMUST00000196922 1165 ntBASIC30,71■■■□□ 2,51
Col16a1Q8BLX7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Col16a1Q8BLX7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC30,7■■■□□ 2,5
Col16a1Q8BLX7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30,7■■■□□ 2,5
Col16a1Q8BLX7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Col16a1Q8BLX7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Col16a1Q8BLX7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30,68■■■□□ 2,5
Col16a1Q8BLX7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
Col16a1Q8BLX7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
Col16a1Q8BLX7 Gm45444-201ENSMUST00000211394 898 ntBASIC30,67■■■□□ 2,5
Col16a1Q8BLX7 Rps24-207ENSMUST00000224568 714 ntBASIC30,67■■■□□ 2,5
Col16a1Q8BLX7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Col16a1Q8BLX7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Col16a1Q8BLX7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Col16a1Q8BLX7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30,66■■■□□ 2,5
Col16a1Q8BLX7 Gm15820-201ENSMUST00000201566 728 ntBASIC30,65■■■□□ 2,5
Col16a1Q8BLX7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30,64■■■□□ 2,5
Col16a1Q8BLX7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC30,64■■■□□ 2,5
Col16a1Q8BLX7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Col16a1Q8BLX7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC30,63■■■□□ 2,49
Col16a1Q8BLX7 Nsd1-203ENSMUST00000224156 1149 ntBASIC30,63■■■□□ 2,49
Col16a1Q8BLX7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30,63■■■□□ 2,49
Col16a1Q8BLX7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Col16a1Q8BLX7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Retrieved 100 of 76,532 protein–RNA pairs in 28,8 ms