Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Limd2Q8BGB5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limd2Q8BGB5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limd2Q8BGB5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Limd2Q8BGB5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limd2Q8BGB5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limd2Q8BGB5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Limd2Q8BGB5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC12.49□□□□□ -0.41
Limd2Q8BGB5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Limd2Q8BGB5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Limd2Q8BGB5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Limd2Q8BGB5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Gm38160-201ENSMUST00000193090 2499 ntBASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Limd2Q8BGB5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Limd2Q8BGB5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Limd2Q8BGB5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Limd2Q8BGB5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Limd2Q8BGB5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Limd2Q8BGB5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Limd2Q8BGB5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Limd2Q8BGB5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Limd2Q8BGB5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC12.43□□□□□ -0.42
Limd2Q8BGB5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Limd2Q8BGB5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Limd2Q8BGB5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Limd2Q8BGB5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Limd2Q8BGB5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Limd2Q8BGB5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Limd2Q8BGB5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Limd2Q8BGB5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Limd2Q8BGB5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
Limd2Q8BGB5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Limd2Q8BGB5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Limd2Q8BGB5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Limd2Q8BGB5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms