Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Negr1Q80Z24 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Negr1Q80Z24 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Negr1Q80Z24 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Negr1Q80Z24 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Negr1Q80Z24 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Gm11599-201ENSMUST00000118720 878 ntBASIC19.97■□□□□ 0.79
Negr1Q80Z24 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Negr1Q80Z24 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Negr1Q80Z24 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Negr1Q80Z24 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Negr1Q80Z24 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Negr1Q80Z24 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.95■□□□□ 0.78
Negr1Q80Z24 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Negr1Q80Z24 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Negr1Q80Z24 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Negr1Q80Z24 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Negr1Q80Z24 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Negr1Q80Z24 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Negr1Q80Z24 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Negr1Q80Z24 Gm4799-201ENSMUST00000095396 657 ntBASIC19.94■□□□□ 0.78
Negr1Q80Z24 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Negr1Q80Z24 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Negr1Q80Z24 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Negr1Q80Z24 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.93■□□□□ 0.78
Negr1Q80Z24 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Negr1Q80Z24 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Negr1Q80Z24 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Negr1Q80Z24 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Negr1Q80Z24 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.91■□□□□ 0.78
Negr1Q80Z24 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.9■□□□□ 0.78
Negr1Q80Z24 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Negr1Q80Z24 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.89■□□□□ 0.78
Negr1Q80Z24 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Negr1Q80Z24 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Negr1Q80Z24 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.89■□□□□ 0.77
Negr1Q80Z24 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.89■□□□□ 0.77
Negr1Q80Z24 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Negr1Q80Z24 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Negr1Q80Z24 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Negr1Q80Z24 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.87■□□□□ 0.77
Negr1Q80Z24 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Negr1Q80Z24 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Negr1Q80Z24 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Negr1Q80Z24 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Negr1Q80Z24 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Negr1Q80Z24 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Negr1Q80Z24 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Negr1Q80Z24 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Negr1Q80Z24 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.85■□□□□ 0.77
Negr1Q80Z24 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Negr1Q80Z24 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Negr1Q80Z24 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Negr1Q80Z24 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Negr1Q80Z24 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Negr1Q80Z24 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Negr1Q80Z24 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Negr1Q80Z24 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Negr1Q80Z24 Mir3960-201ENSMUST00000198213 73 ntBASIC19.83■□□□□ 0.77
Negr1Q80Z24 Gm45364-201ENSMUST00000210883 159 ntBASIC19.83■□□□□ 0.77
Negr1Q80Z24 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Negr1Q80Z24 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Negr1Q80Z24 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Negr1Q80Z24 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Negr1Q80Z24 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Negr1Q80Z24 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Negr1Q80Z24 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Negr1Q80Z24 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Negr1Q80Z24 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.79■□□□□ 0.76
Negr1Q80Z24 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.79■□□□□ 0.76
Negr1Q80Z24 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Negr1Q80Z24 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Negr1Q80Z24 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms