Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Syne1Q6ZWR6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Syne1Q6ZWR6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Syne1Q6ZWR6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Terc-201ENSMUST00000082862 423 ntBASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Syne1Q6ZWR6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne1Q6ZWR6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Gm37847-201ENSMUST00000192163 1497 ntBASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Gm31748-201ENSMUST00000194938 1497 ntBASIC7.71□□□□□ -1.17
Syne1Q6ZWR6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Gm45102-201ENSMUST00000207427 857 ntBASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne1Q6ZWR6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Gm5522-201ENSMUST00000189483 1242 ntBASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
Syne1Q6ZWR6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 Gm15546-201ENSMUST00000122095 826 ntBASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 AC153911.1-201ENSMUST00000220378 758 ntBASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 Gm14121-201ENSMUST00000121441 1380 ntBASIC7.69□□□□□ -1.18
Syne1Q6ZWR6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms