Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.19■□□□□ 0.98
Timd4Q6U7R4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Timd4Q6U7R4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.19■□□□□ 0.98
Timd4Q6U7R4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Timd4Q6U7R4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Timd4Q6U7R4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Timd4Q6U7R4 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.18■□□□□ 0.98
Timd4Q6U7R4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Timd4Q6U7R4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timd4Q6U7R4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timd4Q6U7R4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timd4Q6U7R4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
Timd4Q6U7R4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Timd4Q6U7R4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Timd4Q6U7R4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Timd4Q6U7R4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Gm9812-201ENSMUST00000061934 968 ntBASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Timd4Q6U7R4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Timd4Q6U7R4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Timd4Q6U7R4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Timd4Q6U7R4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Timd4Q6U7R4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Timd4Q6U7R4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Timd4Q6U7R4 Gm11175-201ENSMUST00000116172 543 ntBASIC21.12■□□□□ 0.97
Timd4Q6U7R4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Timd4Q6U7R4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.11■□□□□ 0.97
Timd4Q6U7R4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Timd4Q6U7R4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Timd4Q6U7R4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Timd4Q6U7R4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Timd4Q6U7R4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Timd4Q6U7R4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Timd4Q6U7R4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Timd4Q6U7R4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Timd4Q6U7R4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Timd4Q6U7R4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Timd4Q6U7R4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Timd4Q6U7R4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Timd4Q6U7R4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Timd4Q6U7R4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Timd4Q6U7R4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
Timd4Q6U7R4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Timd4Q6U7R4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Timd4Q6U7R4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Timd4Q6U7R4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Timd4Q6U7R4 Scarna2-201ENSMUST00000157560 414 ntBASIC21.05■□□□□ 0.96
Timd4Q6U7R4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Timd4Q6U7R4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timd4Q6U7R4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Timd4Q6U7R4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Timd4Q6U7R4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Timd4Q6U7R4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Timd4Q6U7R4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timd4Q6U7R4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Timd4Q6U7R4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Timd4Q6U7R4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Timd4Q6U7R4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.99■□□□□ 0.95
Timd4Q6U7R4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Timd4Q6U7R4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.99■□□□□ 0.95
Timd4Q6U7R4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.99■□□□□ 0.95
Timd4Q6U7R4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.99■□□□□ 0.95
Timd4Q6U7R4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Timd4Q6U7R4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Timd4Q6U7R4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Timd4Q6U7R4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Timd4Q6U7R4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.98■□□□□ 0.95
Timd4Q6U7R4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms