Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp248Q640N4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.2■□□□□ 0.34
Zfp248Q640N4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp248Q640N4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp248Q640N4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp248Q640N4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Zfp248Q640N4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfp248Q640N4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Zfp248Q640N4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfp248Q640N4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfp248Q640N4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Zfp248Q640N4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zfp248Q640N4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Zfp248Q640N4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Zfp248Q640N4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.17■□□□□ 0.34
Zfp248Q640N4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Zfp248Q640N4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zfp248Q640N4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zfp248Q640N4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zfp248Q640N4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Zfp248Q640N4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp248Q640N4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp248Q640N4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Zfp248Q640N4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Zfp248Q640N4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.14■□□□□ 0.33
Zfp248Q640N4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp248Q640N4 Gm8503-201ENSMUST00000118131 455 ntBASIC17.14■□□□□ 0.33
Zfp248Q640N4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp248Q640N4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp248Q640N4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp248Q640N4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp248Q640N4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp248Q640N4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp248Q640N4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp248Q640N4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.12■□□□□ 0.33
Zfp248Q640N4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp248Q640N4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp248Q640N4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp248Q640N4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Zfp248Q640N4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.1■□□□□ 0.33
Zfp248Q640N4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.09■□□□□ 0.33
Zfp248Q640N4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Zfp248Q640N4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp248Q640N4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Zfp248Q640N4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zfp248Q640N4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Zfp248Q640N4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Zfp248Q640N4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Zfp248Q640N4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zfp248Q640N4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zfp248Q640N4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp248Q640N4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp248Q640N4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.08■□□□□ 0.32
Zfp248Q640N4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp248Q640N4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp248Q640N4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zfp248Q640N4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.08■□□□□ 0.32
Zfp248Q640N4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zfp248Q640N4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp248Q640N4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp248Q640N4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp248Q640N4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp248Q640N4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.05■□□□□ 0.32
Zfp248Q640N4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.05■□□□□ 0.32
Zfp248Q640N4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
Zfp248Q640N4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp248Q640N4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp248Q640N4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp248Q640N4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Zfp248Q640N4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.03■□□□□ 0.32
Zfp248Q640N4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp248Q640N4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms