Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox19Q62249 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox19Q62249 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox19Q62249 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox19Q62249 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox19Q62249 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox19Q62249 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox19Q62249 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sox19Q62249 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox19Q62249 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Sox19Q62249 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sox19Q62249 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox19Q62249 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox19Q62249 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox19Q62249 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox19Q62249 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox19Q62249 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sox19Q62249 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sox19Q62249 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox19Q62249 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox19Q62249 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sox19Q62249 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox19Q62249 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox19Q62249 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox19Q62249 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.31■□□□□ 0.68
Sox19Q62249 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Sox19Q62249 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox19Q62249 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox19Q62249 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox19Q62249 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sox19Q62249 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox19Q62249 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sox19Q62249 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox19Q62249 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sox19Q62249 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox19Q62249 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox19Q62249 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox19Q62249 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox19Q62249 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox19Q62249 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Sox19Q62249 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox19Q62249 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox19Q62249 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.27■□□□□ 0.68
Sox19Q62249 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox19Q62249 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox19Q62249 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox19Q62249 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.27■□□□□ 0.68
Sox19Q62249 Zfp131-205ENSMUST00000223812 663 ntBASIC19.27■□□□□ 0.68
Sox19Q62249 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sox19Q62249 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sox19Q62249 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox19Q62249 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sox19Q62249 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox19Q62249 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sox19Q62249 Gm24970-201ENSMUST00000175582 82 ntBASIC19.26■□□□□ 0.67
Sox19Q62249 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.26■□□□□ 0.67
Sox19Q62249 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox19Q62249 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox19Q62249 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox19Q62249 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox19Q62249 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.25■□□□□ 0.67
Sox19Q62249 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox19Q62249 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox19Q62249 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.25■□□□□ 0.67
Sox19Q62249 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.25■□□□□ 0.67
Sox19Q62249 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox19Q62249 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Sox19Q62249 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.24■□□□□ 0.67
Sox19Q62249 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sox19Q62249 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sox19Q62249 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox19Q62249 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.24■□□□□ 0.67
Sox19Q62249 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Sox19Q62249 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox19Q62249 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox19Q62249 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox19Q62249 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox19Q62249 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.22■□□□□ 0.67
Sox19Q62249 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox19Q62249 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox19Q62249 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox19Q62249 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox19Q62249 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.21■□□□□ 0.67
Sox19Q62249 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms