Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SspnQ62147 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SspnQ62147 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SspnQ62147 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.83■□□□□ 0.61
SspnQ62147 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SspnQ62147 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SspnQ62147 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SspnQ62147 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SspnQ62147 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
SspnQ62147 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SspnQ62147 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SspnQ62147 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SspnQ62147 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.81■□□□□ 0.6
SspnQ62147 Gm37136-201ENSMUST00000194368 194 ntBASIC18.81■□□□□ 0.6
SspnQ62147 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SspnQ62147 Gm8503-201ENSMUST00000118131 455 ntBASIC18.8■□□□□ 0.6
SspnQ62147 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SspnQ62147 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SspnQ62147 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SspnQ62147 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SspnQ62147 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SspnQ62147 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SspnQ62147 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.79■□□□□ 0.6
SspnQ62147 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SspnQ62147 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SspnQ62147 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SspnQ62147 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SspnQ62147 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SspnQ62147 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SspnQ62147 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SspnQ62147 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SspnQ62147 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SspnQ62147 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.76■□□□□ 0.59
SspnQ62147 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SspnQ62147 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SspnQ62147 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SspnQ62147 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.75■□□□□ 0.59
SspnQ62147 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SspnQ62147 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SspnQ62147 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SspnQ62147 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SspnQ62147 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SspnQ62147 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SspnQ62147 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SspnQ62147 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SspnQ62147 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SspnQ62147 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SspnQ62147 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SspnQ62147 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.74■□□□□ 0.59
SspnQ62147 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SspnQ62147 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SspnQ62147 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.74■□□□□ 0.59
SspnQ62147 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SspnQ62147 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SspnQ62147 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SspnQ62147 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SspnQ62147 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SspnQ62147 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SspnQ62147 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SspnQ62147 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.73■□□□□ 0.59
SspnQ62147 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.72■□□□□ 0.59
SspnQ62147 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SspnQ62147 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SspnQ62147 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.72■□□□□ 0.59
SspnQ62147 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SspnQ62147 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SspnQ62147 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
SspnQ62147 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SspnQ62147 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SspnQ62147 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SspnQ62147 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SspnQ62147 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SspnQ62147 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SspnQ62147 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.71■□□□□ 0.59
SspnQ62147 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SspnQ62147 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SspnQ62147 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SspnQ62147 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.7■□□□□ 0.58
SspnQ62147 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.7■□□□□ 0.58
SspnQ62147 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SspnQ62147 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SspnQ62147 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SspnQ62147 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SspnQ62147 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SspnQ62147 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SspnQ62147 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SspnQ62147 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
SspnQ62147 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SspnQ62147 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.68■□□□□ 0.58
SspnQ62147 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.68■□□□□ 0.58
SspnQ62147 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SspnQ62147 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SspnQ62147 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SspnQ62147 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SspnQ62147 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SspnQ62147 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SspnQ62147 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SspnQ62147 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SspnQ62147 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SspnQ62147 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms