Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Foxj1Q61660 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxj1Q61660 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxj1Q61660 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Foxj1Q61660 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.24■■□□□ 1.31
Foxj1Q61660 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Foxj1Q61660 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Foxj1Q61660 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Foxj1Q61660 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxj1Q61660 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.23■■□□□ 1.31
Foxj1Q61660 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxj1Q61660 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxj1Q61660 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxj1Q61660 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.23■■□□□ 1.31
Foxj1Q61660 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxj1Q61660 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Foxj1Q61660 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxj1Q61660 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxj1Q61660 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Foxj1Q61660 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.2■■□□□ 1.3
Foxj1Q61660 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Foxj1Q61660 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxj1Q61660 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxj1Q61660 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxj1Q61660 Gm10420-201ENSMUST00000121713 882 ntBASIC23.19■■□□□ 1.3
Foxj1Q61660 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Foxj1Q61660 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.19■■□□□ 1.3
Foxj1Q61660 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxj1Q61660 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxj1Q61660 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Foxj1Q61660 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.18■■□□□ 1.3
Foxj1Q61660 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxj1Q61660 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxj1Q61660 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Gm5921-201ENSMUST00000075898 882 ntBASIC23.17■■□□□ 1.3
Foxj1Q61660 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Foxj1Q61660 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxj1Q61660 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxj1Q61660 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxj1Q61660 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.16■■□□□ 1.3
Foxj1Q61660 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Foxj1Q61660 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxj1Q61660 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxj1Q61660 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Foxj1Q61660 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Foxj1Q61660 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Foxj1Q61660 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
Foxj1Q61660 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Foxj1Q61660 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.13■■□□□ 1.29
Foxj1Q61660 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.13■■□□□ 1.29
Foxj1Q61660 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxj1Q61660 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Foxj1Q61660 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxj1Q61660 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Foxj1Q61660 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.12■■□□□ 1.29
Foxj1Q61660 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Foxj1Q61660 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxj1Q61660 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxj1Q61660 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxj1Q61660 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Foxj1Q61660 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Foxj1Q61660 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.1■■□□□ 1.29
Foxj1Q61660 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.1■■□□□ 1.29
Foxj1Q61660 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Foxj1Q61660 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Foxj1Q61660 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Foxj1Q61660 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Foxj1Q61660 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Foxj1Q61660 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.09■■□□□ 1.29
Foxj1Q61660 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.09■■□□□ 1.29
Foxj1Q61660 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Foxj1Q61660 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Foxj1Q61660 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Foxj1Q61660 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Foxj1Q61660 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Foxj1Q61660 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Foxj1Q61660 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Foxj1Q61660 Terc-201ENSMUST00000082862 423 ntBASIC23.08■■□□□ 1.29
Foxj1Q61660 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.08■■□□□ 1.28
Foxj1Q61660 Gm15546-201ENSMUST00000122095 826 ntBASIC23.07■■□□□ 1.28
Foxj1Q61660 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Foxj1Q61660 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Foxj1Q61660 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Foxj1Q61660 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Foxj1Q61660 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.06■■□□□ 1.28
Foxj1Q61660 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.06■■□□□ 1.28
Foxj1Q61660 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Foxj1Q61660 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Foxj1Q61660 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.05■■□□□ 1.28
Foxj1Q61660 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Foxj1Q61660 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Foxj1Q61660 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Foxj1Q61660 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Foxj1Q61660 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Foxj1Q61660 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms