Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ecm1Q61508 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ecm1Q61508 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
Ecm1Q61508 Amer2-203ENSMUST00000225247 2662 ntBASIC25.84■■□□□ 1.73
Ecm1Q61508 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
Ecm1Q61508 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ecm1Q61508 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.84■■□□□ 1.73
Ecm1Q61508 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ecm1Q61508 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ecm1Q61508 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ecm1Q61508 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ecm1Q61508 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.82■■□□□ 1.72
Ecm1Q61508 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.81■■□□□ 1.72
Ecm1Q61508 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ecm1Q61508 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.8■■□□□ 1.72
Ecm1Q61508 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ecm1Q61508 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ecm1Q61508 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ecm1Q61508 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ecm1Q61508 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.78■■□□□ 1.72
Ecm1Q61508 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ecm1Q61508 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Ecm1Q61508 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ecm1Q61508 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ecm1Q61508 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Ecm1Q61508 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
Ecm1Q61508 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ecm1Q61508 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ecm1Q61508 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ecm1Q61508 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ecm1Q61508 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
Ecm1Q61508 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ecm1Q61508 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ecm1Q61508 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ecm1Q61508 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.73■■□□□ 1.71
Ecm1Q61508 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.73■■□□□ 1.71
Ecm1Q61508 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Ecm1Q61508 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ecm1Q61508 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ecm1Q61508 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ecm1Q61508 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Ecm1Q61508 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Ecm1Q61508 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Ecm1Q61508 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ecm1Q61508 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ecm1Q61508 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Ecm1Q61508 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ecm1Q61508 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ecm1Q61508 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ecm1Q61508 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ecm1Q61508 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Ecm1Q61508 Gm15546-201ENSMUST00000122095 826 ntBASIC25.68■■□□□ 1.7
Ecm1Q61508 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ecm1Q61508 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.67■■□□□ 1.7
Ecm1Q61508 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ecm1Q61508 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Ecm1Q61508 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ecm1Q61508 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.66■■□□□ 1.7
Ecm1Q61508 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.66■■□□□ 1.7
Ecm1Q61508 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ecm1Q61508 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ecm1Q61508 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.65■■□□□ 1.7
Ecm1Q61508 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ecm1Q61508 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.65■■□□□ 1.7
Ecm1Q61508 Gm22567-201ENSMUST00000175542 342 ntBASIC25.64■■□□□ 1.7
Ecm1Q61508 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Ecm1Q61508 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ecm1Q61508 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ecm1Q61508 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.62■■□□□ 1.69
Ecm1Q61508 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Ecm1Q61508 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.62■■□□□ 1.69
Ecm1Q61508 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ecm1Q61508 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.61■■□□□ 1.69
Ecm1Q61508 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ecm1Q61508 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ecm1Q61508 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ecm1Q61508 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ecm1Q61508 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Ecm1Q61508 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.58■■□□□ 1.68
Ecm1Q61508 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.57■■□□□ 1.68
Ecm1Q61508 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Ecm1Q61508 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ecm1Q61508 Gm13238-201ENSMUST00000117655 780 ntBASIC25.55■■□□□ 1.68
Ecm1Q61508 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.55■■□□□ 1.68
Ecm1Q61508 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.55■■□□□ 1.68
Ecm1Q61508 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Ecm1Q61508 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.54■■□□□ 1.68
Ecm1Q61508 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.54■■□□□ 1.68
Ecm1Q61508 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ecm1Q61508 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Ecm1Q61508 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ecm1Q61508 Gm43566-201ENSMUST00000196851 808 ntBASIC25.53■■□□□ 1.68
Ecm1Q61508 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.53■■□□□ 1.68
Ecm1Q61508 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ecm1Q61508 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ecm1Q61508 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.52■■□□□ 1.68
Ecm1Q61508 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ecm1Q61508 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ecm1Q61508 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Ecm1Q61508 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.52■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms