Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Sim2Q61079 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
Sim2Q61079 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sim2Q61079 Gm13238-201ENSMUST00000117655 780 ntBASIC22.55■■□□□ 1.2
Sim2Q61079 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Sim2Q61079 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.55■■□□□ 1.2
Sim2Q61079 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sim2Q61079 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sim2Q61079 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.53■■□□□ 1.2
Sim2Q61079 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.53■■□□□ 1.2
Sim2Q61079 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Sim2Q61079 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
Sim2Q61079 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Sim2Q61079 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sim2Q61079 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Sim2Q61079 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sim2Q61079 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sim2Q61079 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sim2Q61079 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Sim2Q61079 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Sim2Q61079 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sim2Q61079 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.49■■□□□ 1.19
Sim2Q61079 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.49■■□□□ 1.19
Sim2Q61079 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sim2Q61079 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sim2Q61079 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sim2Q61079 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.48■■□□□ 1.19
Sim2Q61079 Gm45444-201ENSMUST00000211394 898 ntBASIC22.48■■□□□ 1.19
Sim2Q61079 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sim2Q61079 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sim2Q61079 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sim2Q61079 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sim2Q61079 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sim2Q61079 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sim2Q61079 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sim2Q61079 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.45■■□□□ 1.18
Sim2Q61079 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sim2Q61079 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sim2Q61079 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.44■■□□□ 1.18
Sim2Q61079 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.44■■□□□ 1.18
Sim2Q61079 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sim2Q61079 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sim2Q61079 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sim2Q61079 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sim2Q61079 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sim2Q61079 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.43■■□□□ 1.18
Sim2Q61079 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sim2Q61079 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sim2Q61079 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sim2Q61079 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sim2Q61079 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sim2Q61079 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sim2Q61079 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sim2Q61079 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sim2Q61079 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sim2Q61079 Gm9959-201ENSMUST00000068277 390 ntBASIC22.41■■□□□ 1.18
Sim2Q61079 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sim2Q61079 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sim2Q61079 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sim2Q61079 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.4■■□□□ 1.18
Sim2Q61079 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Sim2Q61079 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sim2Q61079 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.39■■□□□ 1.18
Sim2Q61079 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Sim2Q61079 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Sim2Q61079 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sim2Q61079 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sim2Q61079 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.39■■□□□ 1.17
Sim2Q61079 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sim2Q61079 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.37■■□□□ 1.17
Sim2Q61079 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.37■■□□□ 1.17
Sim2Q61079 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Sim2Q61079 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sim2Q61079 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Sim2Q61079 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sim2Q61079 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.35■■□□□ 1.17
Sim2Q61079 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sim2Q61079 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.35■■□□□ 1.17
Sim2Q61079 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sim2Q61079 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Sim2Q61079 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sim2Q61079 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sim2Q61079 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.34■■□□□ 1.17
Sim2Q61079 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.34■■□□□ 1.17
Sim2Q61079 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sim2Q61079 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Sim2Q61079 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sim2Q61079 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.33■■□□□ 1.17
Sim2Q61079 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sim2Q61079 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sim2Q61079 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sim2Q61079 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sim2Q61079 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms