Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ClpbQ60649 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClpbQ60649 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.69■■□□□ 1.06
ClpbQ60649 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ClpbQ60649 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
ClpbQ60649 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.68■■□□□ 1.06
ClpbQ60649 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ClpbQ60649 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ClpbQ60649 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.67■■□□□ 1.06
ClpbQ60649 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.66■■□□□ 1.06
ClpbQ60649 Mir3960-201ENSMUST00000198213 73 ntBASIC21.66■■□□□ 1.06
ClpbQ60649 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ClpbQ60649 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.65■■□□□ 1.06
ClpbQ60649 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.65■■□□□ 1.06
ClpbQ60649 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClpbQ60649 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ClpbQ60649 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.64■■□□□ 1.05
ClpbQ60649 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ClpbQ60649 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ClpbQ60649 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ClpbQ60649 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
ClpbQ60649 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ClpbQ60649 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.61■■□□□ 1.05
ClpbQ60649 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ClpbQ60649 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ClpbQ60649 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ClpbQ60649 Mir6538-201ENSMUST00000183713 110 ntBASIC21.61■■□□□ 1.05
ClpbQ60649 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.61■■□□□ 1.05
ClpbQ60649 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.6■■□□□ 1.05
ClpbQ60649 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClpbQ60649 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ClpbQ60649 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
ClpbQ60649 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.59■■□□□ 1.05
ClpbQ60649 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.59■■□□□ 1.05
ClpbQ60649 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ClpbQ60649 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ClpbQ60649 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ClpbQ60649 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ClpbQ60649 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ClpbQ60649 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ClpbQ60649 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ClpbQ60649 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ClpbQ60649 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ClpbQ60649 Gm11175-201ENSMUST00000116172 543 ntBASIC21.57■■□□□ 1.04
ClpbQ60649 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ClpbQ60649 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ClpbQ60649 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClpbQ60649 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClpbQ60649 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClpbQ60649 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClpbQ60649 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
ClpbQ60649 Gm45364-201ENSMUST00000210883 159 ntBASIC21.55■■□□□ 1.04
ClpbQ60649 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClpbQ60649 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ClpbQ60649 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ClpbQ60649 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ClpbQ60649 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ClpbQ60649 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClpbQ60649 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ClpbQ60649 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ClpbQ60649 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClpbQ60649 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClpbQ60649 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ClpbQ60649 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ClpbQ60649 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ClpbQ60649 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.52■■□□□ 1.03
ClpbQ60649 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ClpbQ60649 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Scarna2-201ENSMUST00000157560 414 ntBASIC21.51■■□□□ 1.03
ClpbQ60649 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClpbQ60649 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Gm9806-201ENSMUST00000051080 552 ntBASIC21.5■■□□□ 1.03
ClpbQ60649 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClpbQ60649 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.5■■□□□ 1.03
ClpbQ60649 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ClpbQ60649 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms