Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h4Q60641 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.55■■□□□ 1.04
Nr1h4Q60641 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h4Q60641 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h4Q60641 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.54■■□□□ 1.04
Nr1h4Q60641 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1h4Q60641 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Nr1h4Q60641 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nr1h4Q60641 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1h4Q60641 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1h4Q60641 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nr1h4Q60641 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.53■■□□□ 1.04
Nr1h4Q60641 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Nr1h4Q60641 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1h4Q60641 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nr1h4Q60641 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.52■■□□□ 1.04
Nr1h4Q60641 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Nr1h4Q60641 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.51■■□□□ 1.03
Nr1h4Q60641 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.51■■□□□ 1.03
Nr1h4Q60641 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Nr1h4Q60641 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1h4Q60641 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Nr1h4Q60641 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1h4Q60641 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nr1h4Q60641 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Nr1h4Q60641 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nr1h4Q60641 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1h4Q60641 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.49■■□□□ 1.03
Nr1h4Q60641 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1h4Q60641 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nr1h4Q60641 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nr1h4Q60641 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nr1h4Q60641 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1h4Q60641 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Nr1h4Q60641 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1h4Q60641 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1h4Q60641 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1h4Q60641 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1h4Q60641 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1h4Q60641 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1h4Q60641 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1h4Q60641 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Nr1h4Q60641 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1h4Q60641 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1h4Q60641 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1h4Q60641 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.43■■□□□ 1.02
Nr1h4Q60641 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.43■■□□□ 1.02
Nr1h4Q60641 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Nr1h4Q60641 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1h4Q60641 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h4Q60641 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h4Q60641 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1h4Q60641 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Nr1h4Q60641 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nr1h4Q60641 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1h4Q60641 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h4Q60641 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1h4Q60641 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Nr1h4Q60641 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h4Q60641 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Nr1h4Q60641 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1h4Q60641 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nr1h4Q60641 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h4Q60641 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nr1h4Q60641 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Nr1h4Q60641 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Nkain2-201ENSMUST00000092602 558 ntBASIC21.35■■□□□ 1.01
Nr1h4Q60641 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.35■■□□□ 1.01
Nr1h4Q60641 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Nr1h4Q60641 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms