Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tmem40Q4FJU9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem40Q4FJU9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem40Q4FJU9 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem40Q4FJU9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Tmem40Q4FJU9 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem40Q4FJU9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem40Q4FJU9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem40Q4FJU9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem40Q4FJU9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tmem40Q4FJU9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem40Q4FJU9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.28■□□□□ 0.68
Tmem40Q4FJU9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem40Q4FJU9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
Tmem40Q4FJU9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem40Q4FJU9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem40Q4FJU9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.25■□□□□ 0.67
Tmem40Q4FJU9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tmem40Q4FJU9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem40Q4FJU9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.24■□□□□ 0.67
Tmem40Q4FJU9 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.24■□□□□ 0.67
Tmem40Q4FJU9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem40Q4FJU9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem40Q4FJU9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem40Q4FJU9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.23■□□□□ 0.67
Tmem40Q4FJU9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem40Q4FJU9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem40Q4FJU9 Gm9812-201ENSMUST00000061934 968 ntBASIC19.23■□□□□ 0.67
Tmem40Q4FJU9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem40Q4FJU9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem40Q4FJU9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem40Q4FJU9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem40Q4FJU9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem40Q4FJU9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Gm10420-201ENSMUST00000121713 882 ntBASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tmem40Q4FJU9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem40Q4FJU9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem40Q4FJU9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.16■□□□□ 0.66
Tmem40Q4FJU9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.15■□□□□ 0.66
Tmem40Q4FJU9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem40Q4FJU9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tmem40Q4FJU9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Tmem40Q4FJU9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem40Q4FJU9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.14■□□□□ 0.65
Tmem40Q4FJU9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem40Q4FJU9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem40Q4FJU9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms