Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa3Q3UPR0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa3Q3UPR0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa3Q3UPR0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa3Q3UPR0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa3Q3UPR0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa3Q3UPR0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.66■□□□□ 0.74
Shisa3Q3UPR0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa3Q3UPR0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa3Q3UPR0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa3Q3UPR0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa3Q3UPR0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa3Q3UPR0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa3Q3UPR0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa3Q3UPR0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Particl-201ENSMUST00000205370 1560 ntBASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa3Q3UPR0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa3Q3UPR0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa3Q3UPR0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa3Q3UPR0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa3Q3UPR0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa3Q3UPR0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa3Q3UPR0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa3Q3UPR0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa3Q3UPR0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Shisa3Q3UPR0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa3Q3UPR0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa3Q3UPR0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa3Q3UPR0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa3Q3UPR0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa3Q3UPR0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Shisa3Q3UPR0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa3Q3UPR0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa3Q3UPR0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa3Q3UPR0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa3Q3UPR0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa3Q3UPR0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shisa3Q3UPR0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisa3Q3UPR0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shisa3Q3UPR0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shisa3Q3UPR0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.52■□□□□ 0.71
Shisa3Q3UPR0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shisa3Q3UPR0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisa3Q3UPR0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms