Protein–RNA interactions for Protein: Q30KM9

Defb43, Beta-defensin 43, mousemouse

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb43Q30KM9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.4■■□□□ 1.02
Defb43Q30KM9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb43Q30KM9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.4■■□□□ 1.02
Defb43Q30KM9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb43Q30KM9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb43Q30KM9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Defb43Q30KM9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Defb43Q30KM9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Defb43Q30KM9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Defb43Q30KM9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Defb43Q30KM9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.39■■□□□ 1.01
Defb43Q30KM9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Defb43Q30KM9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.38■■□□□ 1.01
Defb43Q30KM9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.38■■□□□ 1.01
Defb43Q30KM9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.38■■□□□ 1.01
Defb43Q30KM9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.38■■□□□ 1.01
Defb43Q30KM9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Defb43Q30KM9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Defb43Q30KM9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Defb43Q30KM9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.37■■□□□ 1.01
Defb43Q30KM9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.37■■□□□ 1.01
Defb43Q30KM9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.37■■□□□ 1.01
Defb43Q30KM9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Defb43Q30KM9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Defb43Q30KM9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Defb43Q30KM9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Defb43Q30KM9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Defb43Q30KM9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Defb43Q30KM9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Defb43Q30KM9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Defb43Q30KM9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Defb43Q30KM9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Defb43Q30KM9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Defb43Q30KM9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.32■■□□□ 1
Defb43Q30KM9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Defb43Q30KM9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.32■■□□□ 1
Defb43Q30KM9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Defb43Q30KM9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Defb43Q30KM9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Defb43Q30KM9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.31■■□□□ 1
Defb43Q30KM9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Defb43Q30KM9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.3■■□□□ 1
Defb43Q30KM9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.3■■□□□ 1
Defb43Q30KM9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Defb43Q30KM9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.29■■□□□ 1
Defb43Q30KM9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Defb43Q30KM9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.29■■□□□ 1
Defb43Q30KM9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Defb43Q30KM9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.28■■□□□ 1
Defb43Q30KM9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Defb43Q30KM9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.28■■□□□ 1
Defb43Q30KM9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb43Q30KM9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.28■■□□□ 1
Defb43Q30KM9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb43Q30KM9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb43Q30KM9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Defb43Q30KM9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Defb43Q30KM9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Defb43Q30KM9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.27■■□□□ 1
Defb43Q30KM9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Defb43Q30KM9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Defb43Q30KM9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Defb43Q30KM9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Defb43Q30KM9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Defb43Q30KM9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Defb43Q30KM9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Defb43Q30KM9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Defb43Q30KM9 Terc-201ENSMUST00000082862 423 ntBASIC21.25■□□□□ 0.99
Defb43Q30KM9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb43Q30KM9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb43Q30KM9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb43Q30KM9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Defb43Q30KM9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Defb43Q30KM9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Defb43Q30KM9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Defb43Q30KM9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Defb43Q30KM9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Defb43Q30KM9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Defb43Q30KM9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.21■□□□□ 0.99
Defb43Q30KM9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Defb43Q30KM9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 186.9 ms