Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.43■□□□□ 0.7
Smn1P97801 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.43■□□□□ 0.7
Smn1P97801 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smn1P97801 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smn1P97801 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smn1P97801 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smn1P97801 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.42■□□□□ 0.7
Smn1P97801 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smn1P97801 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Gm45855-201ENSMUST00000212546 880 ntBASIC19.41■□□□□ 0.7
Smn1P97801 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smn1P97801 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smn1P97801 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smn1P97801 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.39■□□□□ 0.7
Smn1P97801 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smn1P97801 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smn1P97801 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smn1P97801 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.38■□□□□ 0.69
Smn1P97801 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Smn1P97801 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smn1P97801 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smn1P97801 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
Smn1P97801 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.38■□□□□ 0.69
Smn1P97801 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smn1P97801 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smn1P97801 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smn1P97801 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smn1P97801 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smn1P97801 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smn1P97801 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smn1P97801 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
Smn1P97801 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smn1P97801 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smn1P97801 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Smn1P97801 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smn1P97801 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smn1P97801 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smn1P97801 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smn1P97801 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smn1P97801 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.34■□□□□ 0.69
Smn1P97801 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smn1P97801 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smn1P97801 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smn1P97801 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Smn1P97801 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smn1P97801 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smn1P97801 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Smn1P97801 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smn1P97801 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.32■□□□□ 0.68
Smn1P97801 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smn1P97801 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smn1P97801 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smn1P97801 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smn1P97801 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smn1P97801 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smn1P97801 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smn1P97801 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Smn1P97801 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smn1P97801 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smn1P97801 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smn1P97801 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smn1P97801 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smn1P97801 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smn1P97801 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smn1P97801 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smn1P97801 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smn1P97801 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.29■□□□□ 0.68
Smn1P97801 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smn1P97801 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
Smn1P97801 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smn1P97801 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smn1P97801 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms