Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacna1aP97445 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cacna1aP97445 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacna1aP97445 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacna1aP97445 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cacna1aP97445 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Cacna1aP97445 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cacna1aP97445 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.28■■□□□ 1
Cacna1aP97445 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cacna1aP97445 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cacna1aP97445 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cacna1aP97445 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cacna1aP97445 Zxda-201ENSMUST00000117281 2621 ntBASIC21.26■□□□□ 0.99
Cacna1aP97445 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1aP97445 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1aP97445 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacna1aP97445 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cacna1aP97445 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.25■□□□□ 0.99
Cacna1aP97445 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacna1aP97445 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1aP97445 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1aP97445 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1aP97445 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacna1aP97445 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.23■□□□□ 0.99
Cacna1aP97445 Gm43566-201ENSMUST00000196851 808 ntBASIC21.23■□□□□ 0.99
Cacna1aP97445 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cacna1aP97445 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1aP97445 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacna1aP97445 Gm45102-201ENSMUST00000207427 857 ntBASIC21.23■□□□□ 0.99
Cacna1aP97445 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.23■□□□□ 0.99
Cacna1aP97445 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1aP97445 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1aP97445 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cacna1aP97445 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cacna1aP97445 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cacna1aP97445 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
Cacna1aP97445 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.21■□□□□ 0.99
Cacna1aP97445 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.21■□□□□ 0.99
Cacna1aP97445 Gm13238-201ENSMUST00000117655 780 ntBASIC21.21■□□□□ 0.99
Cacna1aP97445 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cacna1aP97445 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Cacna1aP97445 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1aP97445 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1aP97445 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1aP97445 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1aP97445 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.19■□□□□ 0.98
Cacna1aP97445 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
Cacna1aP97445 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1aP97445 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1aP97445 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1aP97445 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cacna1aP97445 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1aP97445 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cacna1aP97445 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Cacna1aP97445 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1aP97445 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cacna1aP97445 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1aP97445 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1aP97445 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.17■□□□□ 0.98
Cacna1aP97445 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1aP97445 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.16■□□□□ 0.98
Cacna1aP97445 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1aP97445 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1aP97445 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1aP97445 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1aP97445 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.15■□□□□ 0.98
Cacna1aP97445 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cacna1aP97445 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
Cacna1aP97445 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1aP97445 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1aP97445 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1aP97445 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.13■□□□□ 0.97
Cacna1aP97445 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.13■□□□□ 0.97
Cacna1aP97445 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1aP97445 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1aP97445 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cacna1aP97445 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.11■□□□□ 0.97
Cacna1aP97445 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1aP97445 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1aP97445 Gm44428-201ENSMUST00000204474 874 ntBASIC21.1■□□□□ 0.97
Cacna1aP97445 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.1■□□□□ 0.97
Cacna1aP97445 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.1■□□□□ 0.97
Cacna1aP97445 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1aP97445 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1aP97445 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.09■□□□□ 0.97
Cacna1aP97445 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1aP97445 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1aP97445 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1aP97445 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1aP97445 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cacna1aP97445 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1aP97445 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1aP97445 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1aP97445 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1aP97445 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1aP97445 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1aP97445 Gm9959-201ENSMUST00000068277 390 ntBASIC21.06■□□□□ 0.96
Cacna1aP97445 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1aP97445 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1aP97445 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms