Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim43cP86449 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim43cP86449 Mir3960-201ENSMUST00000198213 73 ntBASIC24.89■■□□□ 1.58
Trim43cP86449 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.89■■□□□ 1.58
Trim43cP86449 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim43cP86449 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim43cP86449 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim43cP86449 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
Trim43cP86449 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Trim43cP86449 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim43cP86449 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim43cP86449 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.87■■□□□ 1.57
Trim43cP86449 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim43cP86449 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim43cP86449 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim43cP86449 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.86■■□□□ 1.57
Trim43cP86449 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim43cP86449 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim43cP86449 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim43cP86449 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trim43cP86449 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Trim43cP86449 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Trim43cP86449 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.83■■□□□ 1.57
Trim43cP86449 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.83■■□□□ 1.57
Trim43cP86449 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.83■■□□□ 1.57
Trim43cP86449 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim43cP86449 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim43cP86449 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim43cP86449 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Trim43cP86449 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim43cP86449 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim43cP86449 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim43cP86449 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.81■■□□□ 1.56
Trim43cP86449 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Trim43cP86449 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim43cP86449 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim43cP86449 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim43cP86449 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.79■■□□□ 1.56
Trim43cP86449 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.79■■□□□ 1.56
Trim43cP86449 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim43cP86449 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim43cP86449 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim43cP86449 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim43cP86449 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim43cP86449 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.77■■□□□ 1.56
Trim43cP86449 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim43cP86449 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim43cP86449 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim43cP86449 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Trim43cP86449 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.76■■□□□ 1.55
Trim43cP86449 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim43cP86449 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim43cP86449 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim43cP86449 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Trim43cP86449 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim43cP86449 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.74■■□□□ 1.55
Trim43cP86449 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.73■■□□□ 1.55
Trim43cP86449 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.72■■□□□ 1.55
Trim43cP86449 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Trim43cP86449 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim43cP86449 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.71■■□□□ 1.55
Trim43cP86449 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim43cP86449 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Trim43cP86449 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.7■■□□□ 1.54
Trim43cP86449 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim43cP86449 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.69■■□□□ 1.54
Trim43cP86449 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim43cP86449 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Trim43cP86449 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim43cP86449 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.68■■□□□ 1.54
Trim43cP86449 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim43cP86449 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Trim43cP86449 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.67■■□□□ 1.54
Trim43cP86449 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim43cP86449 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.67■■□□□ 1.54
Trim43cP86449 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim43cP86449 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.66■■□□□ 1.54
Trim43cP86449 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.66■■□□□ 1.54
Trim43cP86449 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim43cP86449 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim43cP86449 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Trim43cP86449 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim43cP86449 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Trim43cP86449 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.64■■□□□ 1.54
Trim43cP86449 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Trim43cP86449 Terc-201ENSMUST00000082862 423 ntBASIC24.64■■□□□ 1.54
Trim43cP86449 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim43cP86449 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim43cP86449 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim43cP86449 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim43cP86449 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.63■■□□□ 1.53
Trim43cP86449 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim43cP86449 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.63■■□□□ 1.53
Trim43cP86449 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim43cP86449 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 164.8 ms