Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3bP84228 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3bP84228 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3bP84228 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.88■□□□□ 0.77
Hist1h3bP84228 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hist1h3bP84228 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3bP84228 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.87■□□□□ 0.77
Hist1h3bP84228 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3bP84228 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3bP84228 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3bP84228 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3bP84228 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.86■□□□□ 0.77
Hist1h3bP84228 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.86■□□□□ 0.77
Hist1h3bP84228 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3bP84228 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3bP84228 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3bP84228 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3bP84228 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3bP84228 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3bP84228 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3bP84228 Gm11599-201ENSMUST00000118720 878 ntBASIC19.85■□□□□ 0.77
Hist1h3bP84228 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hist1h3bP84228 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3bP84228 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3bP84228 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3bP84228 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3bP84228 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3bP84228 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3bP84228 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3bP84228 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3bP84228 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.83■□□□□ 0.77
Hist1h3bP84228 Gm4799-201ENSMUST00000095396 657 ntBASIC19.83■□□□□ 0.77
Hist1h3bP84228 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h3bP84228 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h3bP84228 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h3bP84228 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hist1h3bP84228 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.81■□□□□ 0.76
Hist1h3bP84228 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h3bP84228 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h3bP84228 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h3bP84228 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hist1h3bP84228 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hist1h3bP84228 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hist1h3bP84228 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hist1h3bP84228 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hist1h3bP84228 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h3bP84228 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h3bP84228 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h3bP84228 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hist1h3bP84228 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hist1h3bP84228 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hist1h3bP84228 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.78■□□□□ 0.76
Hist1h3bP84228 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hist1h3bP84228 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Hist1h3bP84228 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hist1h3bP84228 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hist1h3bP84228 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h3bP84228 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h3bP84228 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h3bP84228 Gm9812-201ENSMUST00000061934 968 ntBASIC19.76■□□□□ 0.75
Hist1h3bP84228 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hist1h3bP84228 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hist1h3bP84228 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h3bP84228 Mir3960-201ENSMUST00000198213 73 ntBASIC19.74■□□□□ 0.75
Hist1h3bP84228 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.74■□□□□ 0.75
Hist1h3bP84228 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h3bP84228 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h3bP84228 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hist1h3bP84228 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h3bP84228 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hist1h3bP84228 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h3bP84228 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hist1h3bP84228 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h3bP84228 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h3bP84228 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h3bP84228 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hist1h3bP84228 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.73■□□□□ 0.75
Hist1h3bP84228 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h3bP84228 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h3bP84228 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.72■□□□□ 0.75
Hist1h3bP84228 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hist1h3bP84228 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms