Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.03■□□□□ 0.16
Cks1bP61025 Gm24804-201ENSMUST00000174982 85 ntBASIC16.03■□□□□ 0.16
Cks1bP61025 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1bP61025 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1bP61025 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1bP61025 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.03■□□□□ 0.16
Cks1bP61025 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1bP61025 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cks1bP61025 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.02■□□□□ 0.16
Cks1bP61025 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cks1bP61025 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cks1bP61025 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cks1bP61025 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cks1bP61025 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.02■□□□□ 0.16
Cks1bP61025 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Cks1bP61025 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cks1bP61025 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cks1bP61025 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1bP61025 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1bP61025 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cks1bP61025 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.01■□□□□ 0.15
Cks1bP61025 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1bP61025 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1bP61025 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1bP61025 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cks1bP61025 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cks1bP61025 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1bP61025 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1bP61025 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1bP61025 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1bP61025 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cks1bP61025 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cks1bP61025 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cks1bP61025 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.98■□□□□ 0.15
Cks1bP61025 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.97■□□□□ 0.15
Cks1bP61025 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.97■□□□□ 0.15
Cks1bP61025 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks1bP61025 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.96■□□□□ 0.15
Cks1bP61025 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1bP61025 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1bP61025 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1bP61025 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1bP61025 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cks1bP61025 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cks1bP61025 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1bP61025 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.95■□□□□ 0.14
Cks1bP61025 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1bP61025 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Cks1bP61025 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cks1bP61025 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks1bP61025 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cks1bP61025 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1bP61025 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cks1bP61025 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cks1bP61025 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1bP61025 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks1bP61025 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cks1bP61025 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cks1bP61025 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1bP61025 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.93■□□□□ 0.14
Cks1bP61025 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1bP61025 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cks1bP61025 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cks1bP61025 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Cks1bP61025 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.92■□□□□ 0.14
Cks1bP61025 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cks1bP61025 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks1bP61025 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks1bP61025 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cks1bP61025 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cks1bP61025 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cks1bP61025 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1bP61025 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cks1bP61025 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cks1bP61025 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms