Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm6311-201ENSMUST00000073790 878 ntBASIC19.02■□□□□ 0.64
Lhx4P53776 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx4P53776 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx4P53776 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx4P53776 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lhx4P53776 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx4P53776 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lhx4P53776 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.99■□□□□ 0.63
Lhx4P53776 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lhx4P53776 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx4P53776 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx4P53776 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx4P53776 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx4P53776 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Lhx4P53776 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx4P53776 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Lhx4P53776 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx4P53776 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx4P53776 Gm37136-201ENSMUST00000194368 194 ntBASIC18.97■□□□□ 0.63
Lhx4P53776 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx4P53776 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx4P53776 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx4P53776 Gm4799-201ENSMUST00000095396 657 ntBASIC18.96■□□□□ 0.63
Lhx4P53776 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx4P53776 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx4P53776 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx4P53776 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Lhx4P53776 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx4P53776 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.95■□□□□ 0.62
Lhx4P53776 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lhx4P53776 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lhx4P53776 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx4P53776 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx4P53776 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.94■□□□□ 0.62
Lhx4P53776 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx4P53776 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lhx4P53776 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx4P53776 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.94■□□□□ 0.62
Lhx4P53776 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx4P53776 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx4P53776 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx4P53776 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Lhx4P53776 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.93■□□□□ 0.62
Lhx4P53776 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.93■□□□□ 0.62
Lhx4P53776 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx4P53776 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx4P53776 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx4P53776 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx4P53776 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx4P53776 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lhx4P53776 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.92■□□□□ 0.62
Lhx4P53776 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.92■□□□□ 0.62
Lhx4P53776 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx4P53776 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx4P53776 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Lhx4P53776 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx4P53776 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx4P53776 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.91■□□□□ 0.62
Lhx4P53776 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx4P53776 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Lhx4P53776 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx4P53776 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx4P53776 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx4P53776 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx4P53776 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx4P53776 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx4P53776 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx4P53776 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lhx4P53776 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lhx4P53776 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx4P53776 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx4P53776 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Lhx4P53776 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.87■□□□□ 0.61
Lhx4P53776 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.87■□□□□ 0.61
Lhx4P53776 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx4P53776 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx4P53776 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx4P53776 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx4P53776 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx4P53776 Mir3960-201ENSMUST00000198213 73 ntBASIC18.86■□□□□ 0.61
Lhx4P53776 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx4P53776 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx4P53776 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.85■□□□□ 0.61
Lhx4P53776 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lhx4P53776 Gm11175-201ENSMUST00000116172 543 ntBASIC18.84■□□□□ 0.61
Lhx4P53776 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx4P53776 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx4P53776 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx4P53776 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.83■□□□□ 0.61
Lhx4P53776 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms