Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Nek1P51954 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Nek1P51954 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Nek1P51954 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Nek1P51954 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.32■■□□□ 1.64
Nek1P51954 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Nek1P51954 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Nek1P51954 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Nek1P51954 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.3■■□□□ 1.64
Nek1P51954 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Nek1P51954 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.29■■□□□ 1.64
Nek1P51954 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nek1P51954 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nek1P51954 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Nek1P51954 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.27■■□□□ 1.64
Nek1P51954 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Nek1P51954 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Nek1P51954 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nek1P51954 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Nek1P51954 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nek1P51954 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nek1P51954 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
Nek1P51954 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.26■■□□□ 1.63
Nek1P51954 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Nek1P51954 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Nek1P51954 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Nek1P51954 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nek1P51954 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nek1P51954 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nek1P51954 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nek1P51954 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Nek1P51954 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Nek1P51954 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Nek1P51954 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Nek1P51954 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Nek1P51954 Gm37136-201ENSMUST00000194368 194 ntBASIC25.23■■□□□ 1.63
Nek1P51954 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Nek1P51954 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Nek1P51954 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
Nek1P51954 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.22■■□□□ 1.63
Nek1P51954 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Nek1P51954 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nek1P51954 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.21■■□□□ 1.63
Nek1P51954 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.21■■□□□ 1.63
Nek1P51954 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nek1P51954 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.2■■□□□ 1.63
Nek1P51954 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Nek1P51954 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Nek1P51954 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.2■■□□□ 1.62
Nek1P51954 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Nek1P51954 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Nek1P51954 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Nek1P51954 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Nek1P51954 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Nek1P51954 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nek1P51954 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.18■■□□□ 1.62
Nek1P51954 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Nek1P51954 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
Nek1P51954 Mir6538-201ENSMUST00000183713 110 ntBASIC25.18■■□□□ 1.62
Nek1P51954 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Nek1P51954 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nek1P51954 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Nek1P51954 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Nek1P51954 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Nek1P51954 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Nek1P51954 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.16■■□□□ 1.62
Nek1P51954 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nek1P51954 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Nek1P51954 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Nek1P51954 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Nek1P51954 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Nek1P51954 Gm11175-201ENSMUST00000116172 543 ntBASIC25.14■■□□□ 1.62
Nek1P51954 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Nek1P51954 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Nek1P51954 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Nek1P51954 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
Nek1P51954 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nek1P51954 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.12■■□□□ 1.61
Nek1P51954 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nek1P51954 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nek1P51954 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nek1P51954 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.11■■□□□ 1.61
Nek1P51954 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nek1P51954 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nek1P51954 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nek1P51954 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nek1P51954 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.09■■□□□ 1.61
Nek1P51954 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Nek1P51954 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nek1P51954 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nek1P51954 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Nek1P51954 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Nek1P51954 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Nek1P51954 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Nek1P51954 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms