Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-1P50220 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-1P50220 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-1P50220 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Nkx2-1P50220 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-1P50220 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkx2-1P50220 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.76■□□□□ 0.59
Nkx2-1P50220 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx2-1P50220 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-1P50220 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nkx2-1P50220 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-1P50220 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-1P50220 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nkx2-1P50220 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.74■□□□□ 0.59
Nkx2-1P50220 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.74■□□□□ 0.59
Nkx2-1P50220 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-1P50220 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.73■□□□□ 0.59
Nkx2-1P50220 Gm24970-201ENSMUST00000175582 82 ntBASIC18.73■□□□□ 0.59
Nkx2-1P50220 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-1P50220 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-1P50220 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.72■□□□□ 0.59
Nkx2-1P50220 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.72■□□□□ 0.59
Nkx2-1P50220 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-1P50220 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Nkx2-1P50220 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-1P50220 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-1P50220 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkx2-1P50220 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-1P50220 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx2-1P50220 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-1P50220 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-1P50220 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-1P50220 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-1P50220 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-1P50220 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.68■□□□□ 0.58
Nkx2-1P50220 Gm45855-201ENSMUST00000212546 880 ntBASIC18.68■□□□□ 0.58
Nkx2-1P50220 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkx2-1P50220 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-1P50220 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-1P50220 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-1P50220 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx2-1P50220 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx2-1P50220 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-1P50220 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-1P50220 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.66■□□□□ 0.58
Nkx2-1P50220 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Gm30023-201ENSMUST00000197970 889 ntBASIC18.65■□□□□ 0.58
Nkx2-1P50220 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-1P50220 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx2-1P50220 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Nkx2-1P50220 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-1P50220 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-1P50220 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-1P50220 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-1P50220 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-1P50220 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.63■□□□□ 0.57
Nkx2-1P50220 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms